BLASTX nr result

ID: Bupleurum21_contig00029025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029025
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18449.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002513311.1| splicing endonuclease positive effector sen1...   154   7e-36
ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arab...   132   3e-29
gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease p...   131   5e-29
ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsi...   131   5e-29

>emb|CBI18449.3| unnamed protein product [Vitis vinifera]
          Length = 2154

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/152 (53%), Positives = 112/152 (73%), Gaps = 2/152 (1%)
 Frame = +2

Query: 5    KAARTVIRELVHDAGDDPLELALESAGRQRPSMPKVNA-VSKRQIIQLDVPVEKRHGYIH 181
            K   T I+E V D  DDP ELA++S    +  + K +A + KRQ+IQL +P E R GY+ 
Sbjct: 1169 KTGETAIKESVRDIADDPWELAVKSLKPHQSCLTKPSASIPKRQVIQLQLPGENRSGYLR 1228

Query: 182  RPDGLQNRFKPPKLVDWYKPILELDYFACVGVSTPNEEENRTSCKLKEVPVCFQSPGEYI 361
            + D    RFKPPKL DWY+PILE+DYF  VG+++ +++E++T  KLKEVP+CF+SP +Y+
Sbjct: 1229 KLDAGVKRFKPPKLDDWYRPILEIDYFVTVGLASASKDESQTVNKLKEVPMCFESPDQYV 1288

Query: 362  SIFQPLVLEEFKAQLQSSFVDISFSD-MCCGS 454
             IF+PLVLEEFKAQL SSF+++S S+ MCCGS
Sbjct: 1289 DIFRPLVLEEFKAQLHSSFLEMSSSEGMCCGS 1320


>ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
            communis] gi|223547219|gb|EEF48714.1| splicing
            endonuclease positive effector sen1, putative [Ricinus
            communis]
          Length = 2110

 Score =  154 bits (389), Expect = 7e-36
 Identities = 79/153 (51%), Positives = 111/153 (72%), Gaps = 2/153 (1%)
 Frame = +2

Query: 2    SKAARTVIRELVHDAGDDPLELALESAGRQRPSMPKVNAVS-KRQIIQLDVPVEKRHGYI 178
            S+   ++++++V DA DD  E AL+S  +Q   + K++A   KRQ+IQL  P E R G +
Sbjct: 826  SETRDSILKKIVRDANDDLSESALKSVRQQPSLLAKLSACGPKRQLIQLKTPFENRCGTL 885

Query: 179  HRPDGLQNRFKPPKLVDWYKPILELDYFACVGVSTPNEEENRTSCKLKEVPVCFQSPGEY 358
             R   +  RFKPPKL DWY+PILE++YF  VG+++ +E+E+RT  +LKEVPVCFQSP +Y
Sbjct: 886  QRMGAVFKRFKPPKLDDWYRPILEINYFEAVGLASASEDEDRTVGRLKEVPVCFQSPEQY 945

Query: 359  ISIFQPLVLEEFKAQLQSSFVDI-SFSDMCCGS 454
            + IFQPLVLEEFKAQL SSF+++ S+ DM  G+
Sbjct: 946  VEIFQPLVLEEFKAQLHSSFLEMSSWEDMYYGN 978


>ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
            lyrata] gi|297338763|gb|EFH69180.1| hypothetical protein
            ARALYDRAFT_312653 [Arabidopsis lyrata subsp. lyrata]
          Length = 2129

 Score =  132 bits (332), Expect = 3e-29
 Identities = 70/137 (51%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
 Frame = +2

Query: 23   IRELVHDAGDDPLELALESAGRQRPSMPKVNA-VSKRQIIQLDVPVEKRHGYIHRPDGLQ 199
            +R++V++   DPL+LAL+S   Q   + K    V KRQ+IQL  PV K+     R +   
Sbjct: 892  LRKVVNETEADPLDLALKSLKPQLLPLAKPGPIVPKRQVIQLCAPVTKKSDRWQRQEAGF 951

Query: 200  NRFKPPKLVDWYKPILELDYFACVGVSTPNEEENRTSCKLKEVPVCFQSPGEYISIFQPL 379
             RF+PPKL DW++ IL++DY+A VG+++ N++EN+   K +EVPV F SP +YI IFQPL
Sbjct: 952  KRFRPPKLEDWFRKILQMDYYAIVGLASTNKDENQNVGKFREVPVRFGSPEQYIQIFQPL 1011

Query: 380  VLEEFKAQLQSSFVDIS 430
            VLEEFKAQLQSSF +IS
Sbjct: 1012 VLEEFKAQLQSSFQEIS 1028


>gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
            [Arabidopsis thaliana]
          Length = 2142

 Score =  131 bits (330), Expect = 5e-29
 Identities = 71/144 (49%), Positives = 98/144 (68%), Gaps = 1/144 (0%)
 Frame = +2

Query: 2    SKAARTVIRELVHDAGDDPLELALESAGRQRPSMPKVNA-VSKRQIIQLDVPVEKRHGYI 178
            S A    +R++V++   DPL+LAL+S  RQ   + K    V KRQ+IQL  PV K+    
Sbjct: 886  SNAKGMDLRKVVNETEVDPLDLALKSLKRQSLPLAKSGPIVPKRQVIQLCAPVNKKSDRW 945

Query: 179  HRPDGLQNRFKPPKLVDWYKPILELDYFACVGVSTPNEEENRTSCKLKEVPVCFQSPGEY 358
             R +    RF+PPKL DW++ IL++DY+A VG+++  ++E++   K +EVPV F SP +Y
Sbjct: 946  QRQEAGFKRFRPPKLEDWFRKILQMDYYAIVGLASTKKDESQNVGKFREVPVRFGSPEQY 1005

Query: 359  ISIFQPLVLEEFKAQLQSSFVDIS 430
            I IFQPLVLEEFKAQLQSSF +IS
Sbjct: 1006 IQIFQPLVLEEFKAQLQSSFQEIS 1029


>ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
            gi|332191377|gb|AEE29498.1| hydrolase domain-containing
            protein [Arabidopsis thaliana]
          Length = 2127

 Score =  131 bits (330), Expect = 5e-29
 Identities = 71/144 (49%), Positives = 98/144 (68%), Gaps = 1/144 (0%)
 Frame = +2

Query: 2    SKAARTVIRELVHDAGDDPLELALESAGRQRPSMPKVNA-VSKRQIIQLDVPVEKRHGYI 178
            S A    +R++V++   DPL+LAL+S  RQ   + K    V KRQ+IQL  PV K+    
Sbjct: 980  SNAKGMDLRKVVNETEVDPLDLALKSLKRQSLPLAKSGPIVPKRQVIQLCAPVNKKSDRW 1039

Query: 179  HRPDGLQNRFKPPKLVDWYKPILELDYFACVGVSTPNEEENRTSCKLKEVPVCFQSPGEY 358
             R +    RF+PPKL DW++ IL++DY+A VG+++  ++E++   K +EVPV F SP +Y
Sbjct: 1040 QRQEAGFKRFRPPKLEDWFRKILQMDYYAIVGLASTKKDESQNVGKFREVPVRFGSPEQY 1099

Query: 359  ISIFQPLVLEEFKAQLQSSFVDIS 430
            I IFQPLVLEEFKAQLQSSF +IS
Sbjct: 1100 IQIFQPLVLEEFKAQLQSSFQEIS 1123


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