BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029020
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group] g...    74   9e-12
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    73   2e-11
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ...    73   3e-11
gb|AAC69378.1| putative retroelement pol polyprotein [Arabidopsi...    73   3e-11
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]     71   1e-10

>ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group]
           gi|113595385|dbj|BAF19259.1| Os06g0266100, partial
           [Oryza sativa Japonica Group]
          Length = 399

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = -3

Query: 306 TSKVHPVFHVSQLKKAIG-QSKVHTQLPQVTEQGTFDLSPLRKLDSRVIMKDHKVVYQAL 130
           TS +HPVFHVSQLK A G Q  +H+ LP   +   +   P+  LD+R+I K +  V Q L
Sbjct: 253 TSSIHPVFHVSQLKAAKGFQGALHSTLPSSDDAFQY---PIMLLDNRLIKKGNTTVSQVL 309

Query: 129 IQWKGCSIDEATWEDEDLLKLNFPD 55
           IQW   ++++ATWED + L+  FP+
Sbjct: 310 IQWSDTAVEDATWEDLEDLRARFPE 334


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = -3

Query: 303  SKVHPVFHVSQLKKAIGQSKV-HTQLPQVTEQGTFDLSPLRKLDSRVIMKDHKVVYQALI 127
            S++HPVFHVS LKK IG+  + + +LP +TE+G   L P + L +R + K      ++L+
Sbjct: 1244 SRIHPVFHVSLLKKKIGEVAIANDELPPLTEEGVIRLQPRKVLSTRWVNKGSTSASESLV 1303

Query: 126  QWKGCSIDEATWEDEDLLKLNFPDFIL 46
             W+G   +EATWED   L  +FP+  L
Sbjct: 1304 LWEGLPEEEATWEDSQQLLRSFPNLNL 1330


>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1548

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
 Frame = -3

Query: 309  ATSKVHPVFHVSQLKKAIGQSK-VHTQLPQVTEQGTFDLSPLRKLDSRVIMKDHKVVYQA 133
            A S +HPVFHVSQLK  +  +K V  QLP   +    DL P   L+ R++ K +  + Q 
Sbjct: 1444 ADSLIHPVFHVSQLKSFVPDTKPVFAQLPTAAQLDIADLIPSAVLERRLVKKGNAAIVQV 1503

Query: 132  LIQWKGCSIDEATWEDEDLLKLNFPDFIL---AP*GHGD 25
            L+QW       ATWED D+++  FPD +    AP G G+
Sbjct: 1504 LVQWGSLPPALATWEDYDVVRTRFPDAVAWGQAPIGGGE 1542


>gb|AAC69378.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 945

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -3

Query: 303  SKVHPVFHVSQLKKAIGQSKVHT-QLPQVTEQGTFDLSPLRKLDSRVIMKDHKVVYQALI 127
            +++HPVFHVS LK  +G  +    QLP +   G   L P   L+ R   +D K V   L+
Sbjct: 851  TRIHPVFHVSLLKPWVGDGEPDMGQLPPLRNNGELKLQPTAVLEVRWRSQDKKRVADLLV 910

Query: 126  QWKGCSIDEATWEDEDLLKLNFPDFIL 46
            QW+G  I++ATWE+ D L  +FP+F+L
Sbjct: 911  QWEGLHIEDATWEEYDQLAASFPEFVL 937


>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
          Length = 933

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = -3

Query: 309  ATSKVHPVFHVSQLKKAIG-QSKVHTQLPQVTEQGTFDLSPLRKLDSRVIMKDHKVVYQA 133
            A S VHPVFHVSQLK     +  + +QLP +T+   +   P++ LD+R+  K +KVV Q 
Sbjct: 791  ADSMVHPVFHVSQLKGTQNFKHSIQSQLPNITDHIQY---PVQILDTRIQKKGNKVVRQI 847

Query: 132  LIQWKGCSIDEATWEDEDLLKLNFP 58
            L+ W      EATWEDE+ LK  FP
Sbjct: 848  LVCWSNLPAVEATWEDEEELKQRFP 872