BLASTX nr result

ID: Bupleurum21_contig00029018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029018
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY74913.1| hypothetical protein OsI_02806 [Oryza sativa Indi...    61   5e-11
ref|XP_002528564.1| ATP-binding cassette transporter, putative [...    56   5e-11
emb|CAD59567.1| PDR-like ABC transporter [Oryza sativa Japonica ...    60   8e-11
ref|NP_001172460.1| Os01g0609066 [Oryza sativa Japonica Group] g...    60   8e-11
sp|Q7PC80.1|PDR1_ORYSJ RecName: Full=Probable pleiotropic drug r...    60   8e-11

>gb|EAY74913.1| hypothetical protein OsI_02806 [Oryza sativa Indica Group]
          Length = 1477

 Score = 61.2 bits (147), Expect(2) = 5e-11
 Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 19/93 (20%)
 Frame = +2

Query: 17  MCEQTL*RRPNVWGISGGQKKLATS-------------VRQHID-----QIVKALRPSLH 142
           +C  T+     V GISGGQ+K  T+             +   +D     QIVK+LR ++H
Sbjct: 335 ICADTMVGDDMVRGISGGQRKRVTTDACWASQCIFMDEISTGLDSSTTFQIVKSLRQTIH 394

Query: 143 ILQGTAFISLLQPAPEIVER-DDIFLQSDGHSV 238
           IL GTA ISLLQPAPE  +  DDI L SDGH V
Sbjct: 395 ILGGTAVISLLQPAPETYDLFDDIILLSDGHIV 427



 Score = 30.8 bits (68), Expect(2) = 5e-11
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 234 VYQGSCGHVVEFFKTMGFKYPQ 299
           VYQG   +V+EFF+ MGFK P+
Sbjct: 427 VYQGPRENVLEFFELMGFKCPE 448


>ref|XP_002528564.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223532008|gb|EEF33819.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1423

 Score = 55.8 bits (133), Expect(2) = 5e-11
 Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 21/95 (22%)
 Frame = +2

Query: 17  MCEQTL*RRPNVWGISGGQKKLATSVRQHID--------------------QIVKALRPS 136
           +C  T+     + GISGGQ+K  T+    +                     Q+V +L+  
Sbjct: 309 VCADTMVGDDMLRGISGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTYQVVNSLKQY 368

Query: 137 LHILQGTAFISLLQPAPEIVER-DDIFLQSDGHSV 238
           +HIL+GTA ISLLQPAPE  +  DDI L SDGH V
Sbjct: 369 VHILKGTALISLLQPAPETYDLFDDIILLSDGHIV 403



 Score = 36.2 bits (82), Expect(2) = 5e-11
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = +3

Query: 234 VYQGSCGHVVEFFKTMGFKYPQ 299
           VYQG C  V+EFFK MGFK P+
Sbjct: 403 VYQGPCEQVLEFFKHMGFKCPE 424


>emb|CAD59567.1| PDR-like ABC transporter [Oryza sativa Japonica Group]
           gi|125571129|gb|EAZ12644.1| hypothetical protein
           OsJ_02558 [Oryza sativa Japonica Group]
          Length = 1479

 Score = 60.5 bits (145), Expect(2) = 8e-11
 Identities = 41/95 (43%), Positives = 50/95 (52%), Gaps = 21/95 (22%)
 Frame = +2

Query: 17  MCEQTL*RRPNVWGISGGQKKLATSVRQHID--------------------QIVKALRPS 136
           +C  T+     V GISGGQ+K  T+    +                     QIVK+LR +
Sbjct: 335 ICADTMVGDDMVRGISGGQRKRVTTGEMLVGPANAFFMDEISTGLDSSTTFQIVKSLRQT 394

Query: 137 LHILQGTAFISLLQPAPEIVER-DDIFLQSDGHSV 238
           +HIL GTA ISLLQPAPE  +  DDI L SDGH V
Sbjct: 395 IHILGGTAVISLLQPAPETYDLFDDIILLSDGHIV 429



 Score = 30.8 bits (68), Expect(2) = 8e-11
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 234 VYQGSCGHVVEFFKTMGFKYPQ 299
           VYQG   +V+EFF+ MGFK P+
Sbjct: 429 VYQGPRENVLEFFELMGFKCPE 450


>ref|NP_001172460.1| Os01g0609066 [Oryza sativa Japonica Group]
           gi|255673455|dbj|BAH91190.1| Os01g0609066 [Oryza sativa
           Japonica Group]
          Length = 1472

 Score = 60.5 bits (145), Expect(2) = 8e-11
 Identities = 41/95 (43%), Positives = 50/95 (52%), Gaps = 21/95 (22%)
 Frame = +2

Query: 17  MCEQTL*RRPNVWGISGGQKKLATSVRQHID--------------------QIVKALRPS 136
           +C  T+     V GISGGQ+K  T+    +                     QIVK+LR +
Sbjct: 335 ICADTMVGDDMVRGISGGQRKRVTTGEMLVGPANAFFMDEISTGLDSSTTFQIVKSLRQT 394

Query: 137 LHILQGTAFISLLQPAPEIVER-DDIFLQSDGHSV 238
           +HIL GTA ISLLQPAPE  +  DDI L SDGH V
Sbjct: 395 IHILGGTAVISLLQPAPETYDLFDDIILLSDGHIV 429



 Score = 30.8 bits (68), Expect(2) = 8e-11
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 234 VYQGSCGHVVEFFKTMGFKYPQ 299
           VYQG   +V+EFF+ MGFK P+
Sbjct: 429 VYQGPRENVLEFFELMGFKCPE 450


>sp|Q7PC80.1|PDR1_ORYSJ RecName: Full=Probable pleiotropic drug resistance protein 1
           gi|28144341|tpg|DAA00884.1| TPA_exp: PDR1 ABC
           transporter [Oryza sativa (japonica cultivar-group)]
          Length = 1468

 Score = 60.5 bits (145), Expect(2) = 8e-11
 Identities = 41/95 (43%), Positives = 50/95 (52%), Gaps = 21/95 (22%)
 Frame = +2

Query: 17  MCEQTL*RRPNVWGISGGQKKLATSVRQHID--------------------QIVKALRPS 136
           +C  T+     V GISGGQ+K  T+    +                     QIVK+LR +
Sbjct: 335 ICADTMVGDDMVRGISGGQRKRVTTGEMLVGPANAFFMDEISTGLDSSTTFQIVKSLRQT 394

Query: 137 LHILQGTAFISLLQPAPEIVER-DDIFLQSDGHSV 238
           +HIL GTA ISLLQPAPE  +  DDI L SDGH V
Sbjct: 395 IHILGGTAVISLLQPAPETYDLFDDIILLSDGHIV 429



 Score = 30.8 bits (68), Expect(2) = 8e-11
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 234 VYQGSCGHVVEFFKTMGFKYPQ 299
           VYQG   +V+EFF+ MGFK P+
Sbjct: 429 VYQGPRENVLEFFELMGFKCPE 450


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