BLASTX nr result

ID: Bupleurum21_contig00029001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029001
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39451.1| unknown [Medicago truncatula]                          107   2e-21
ref|XP_002302522.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
emb|CAB65313.1| VAP27 [Nicotiana plumbaginifolia]                     105   6e-21
gb|AEO36391.1| hypothetical protein [Amblyomma maculatum]             105   6e-21
ref|XP_004140485.1| PREDICTED: vesicle-associated protein 1-3-li...   103   2e-20

>gb|AFK39451.1| unknown [Medicago truncatula]
          Length = 240

 Score =  107 bits (266), Expect = 2e-21
 Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = -2

Query: 576 QLSNKSDKHVAFRVKTSNLKKYTVQPKNGIVLPGSQSIVTVTMQAHRKGSSDVLCAAAFL 397
           QLSNK+D +VAF+VKT+N KKY V+P +G+VLP S   VTVTMQA ++  SD+ C   FL
Sbjct: 29  QLSNKTDNYVAFKVKTTNPKKYCVRPNSGVVLPRSTCDVTVTMQAQKEAPSDMQCKDKFL 88

Query: 396 VQSAAAPLGTTLKVTAPEMFNQEAGNHVDERRLVAAFTY--NYDKPVEETSEDQIAVSSE 223
           +QS  A  GTT K   PEMF++EAG++V+E +L   +        PV E S++    SS 
Sbjct: 89  LQSVIASPGTTTKDINPEMFSKEAGHNVEECKLRVVYVAPPGPPSPVREGSDED---SSP 145

Query: 222 DHTADSSGSPDHEITSPKK 166
           D  +++  S   E T+  +
Sbjct: 146 DSVSENGHSNVTEFTAASR 164


>ref|XP_002302522.1| predicted protein [Populus trichocarpa] gi|222844248|gb|EEE81795.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score =  105 bits (263), Expect = 4e-21
 Identities = 57/112 (50%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
 Frame = -2

Query: 576 QLSNKSDKHVAFRVKTSNLKKYTVQPKNGIVLPGSQSIVTVTMQAHRKGSSDVLCAAAFL 397
           QL+NKSDK+VAF+VKT+N +KY V+P +GIV+PGS   VTVTMQA ++  SD+ C   FL
Sbjct: 29  QLTNKSDKYVAFKVKTTNPRKYCVRPNSGIVMPGSTCSVTVTMQAQKEAPSDMQCKDKFL 88

Query: 396 VQSAAAPLGTTLKVTAPEMFNQEAGNHVDERRL-VAAFTYNYDKPVEETSED 244
           +QS  AP GTT K    E+FN+E    V+E +L V     N   PV E S++
Sbjct: 89  LQSVVAPDGTTTKGITSELFNKEGDKVVEEFKLRVVYIPANPPSPVPEESDE 140


>emb|CAB65313.1| VAP27 [Nicotiana plumbaginifolia]
          Length = 240

 Score =  105 bits (262), Expect = 6e-21
 Identities = 55/113 (48%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
 Frame = -2

Query: 576 QLSNKSDKHVAFRVKTSNLKKYTVQPKNGIVLPGSQSIVTVTMQAHRKGSSDVLCAAAFL 397
           QL+NKSD +VAF+VKT+N KKY V+P  G+V+P S S V VTMQA ++  +D+ C   FL
Sbjct: 31  QLTNKSDNYVAFKVKTTNPKKYCVRPNTGVVMPHSASDVIVTMQAQKEAPADMQCKDKFL 90

Query: 396 VQSAAAPLGTTLKVTAPEMFNQEAGNHVDERRLVAAFT--YNYDKPVEETSED 244
           +QS  A  G T K   PEMFN+E GNHV++ +L   +        PV+E SE+
Sbjct: 91  LQSVVASPGATAKDITPEMFNKEEGNHVEDCKLRVIYVPPQQPPSPVQEGSEE 143


>gb|AEO36391.1| hypothetical protein [Amblyomma maculatum]
          Length = 211

 Score =  105 bits (262), Expect = 6e-21
 Identities = 58/112 (51%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
 Frame = -2

Query: 576 QLSNKSDKHVAFRVKTSNLKKYTVQPKNGIVLPGSQSIVTVTMQAHRKGSSDVLCAAAFL 397
           QL+NK+D++VAF+VKT+N KKY V+P  GIVLPGS   VTVTMQA ++G  D+ C   FL
Sbjct: 2   QLTNKTDQYVAFKVKTTNPKKYCVRPNTGIVLPGSTCDVTVTMQAQKEGPVDMQCKDKFL 61

Query: 396 VQSAAAPLGTTLKVTAPEMFNQEAGNHVDERRL-VAAFTYNYDKPVEETSED 244
           +QS  A  G T K   PEMFN+E G  V+E +L V     N   PV E +E+
Sbjct: 62  LQSVVAHDGATTKDITPEMFNKEPGKVVEEFKLRVVYIPANPPSPVPEEAEE 113


>ref|XP_004140485.1| PREDICTED: vesicle-associated protein 1-3-like [Cucumis sativus]
           gi|449521832|ref|XP_004167933.1| PREDICTED:
           vesicle-associated protein 1-3-like [Cucumis sativus]
          Length = 238

 Score =  103 bits (258), Expect = 2e-20
 Identities = 55/112 (49%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
 Frame = -2

Query: 576 QLSNKSDKHVAFRVKTSNLKKYTVQPKNGIVLPGSQSIVTVTMQAHRKGSSDVLCAAAFL 397
           QL+NK+DK+VAF+VKT+N KKY V+P  GI+LP S S +TVTMQA ++   D+ C   FL
Sbjct: 29  QLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSASNITVTMQAPKEAPPDMQCKDKFL 88

Query: 396 VQSAAAPLGTTLKVTAPEMFNQEAGNHVDERRLVAAFTY-NYDKPVEETSED 244
           +QS  AP GTT K  + E+FN+  G  VDE ++   + + N   PV E SE+
Sbjct: 89  IQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANPPSPVPEGSEE 140


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