BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028948
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]   116   2e-24
ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22

>ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
 Frame = +3

Query: 27  LNLLKFPGSVKTLNHLKSIHVHLLTTNLHQNSFAVGNFITHCATL--GCMGYAAQVFDKM 200
           L+LLK     K++   K +H H+L   L  +SF   N +  CA    G M YA  +F ++
Sbjct: 35  LSLLK---RCKSMEEFKQVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFSQI 91

Query: 201 SEPNSFVWNTMIRGFQQNQEPRNALMLFDRMKVEGVSADNFTYPFVIRACSDLLEQCRGL 380
            EP SF +NTMIRG   + +   AL+L+  M   G+  DNFTYPFV++ACS L+    G+
Sbjct: 92  EEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGV 151

Query: 381 VVHGEAFKVGVELDVFVGTSLIEFY 455
            +H   FK G+E+DVFV   LI  Y
Sbjct: 152 QIHAHVFKAGLEVDVFVQNGLISMY 176


>emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
          Length = 516

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/138 (39%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
 Frame = +3

Query: 57  KTLNHLKSIHVHLLTTNLHQNSFAVGNFITHCATLGC--MGYAAQVFDKMSEPNSFVWNT 230
           +++ HL+ +H H++ T L QN F +G  I  CA   C  M YA +VF K+  P+ F+WNT
Sbjct: 62  ESMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMDYALRVFGKIENPDGFLWNT 121

Query: 231 MIRGFQQNQEPRNALMLFDRMKVEGVSADNFTYPFVIRACSDLLEQCRGLVVHGEAFKVG 410
           MIRG  + ++P  A   + RM+V+G   DNFTY F+++ C  L     G  +H    K G
Sbjct: 122 MIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQIHCNVLKHG 181

Query: 411 VELDVFVGTSLIEFYSGF 464
           +E  VFV  +L+  Y  F
Sbjct: 182 LEEHVFVRNTLVHMYGMF 199


>ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/145 (40%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
 Frame = +3

Query: 27  LNLLKFPGSVKTLNHLKSIHVHLLTTNLHQNSFAVGNFITHCATL--GCMGYAAQVFDKM 200
           L+LLK     K++   K +H H+L   L  +SF   N +  CA    G M YA  +F ++
Sbjct: 35  LSLLK---RCKSMEEFKKVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQI 91

Query: 201 SEPNSFVWNTMIRGFQQNQEPRNALMLFDRMKVEGVSADNFTYPFVIRACSDLLEQCRGL 380
            EP SF +NTMIRG   + +   AL+L+  M   G+  DNFTYPFV++ACS L+    G+
Sbjct: 92  EEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGV 151

Query: 381 VVHGEAFKVGVELDVFVGTSLIEFY 455
            +H   F  G+E+DVFV   LI  Y
Sbjct: 152 QIHAHVFNAGLEVDVFVQNGLISMY 176


>ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 604

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/145 (41%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
 Frame = +3

Query: 27  LNLLKFPGSVKTLNHLKSIHVHLLTTNLHQNSFAVGNFITHCATL--GCMGYAAQVFDKM 200
           L+LLK     K++   K +H H+L   L  +SF   N +  CA    G M YA  +F ++
Sbjct: 34  LSLLK---RCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQI 90

Query: 201 SEPNSFVWNTMIRGFQQNQEPRNALMLFDRMKVEGVSADNFTYPFVIRACSDLLEQCRGL 380
            EP SF +NTMIRG   +     AL+L+  M   G+  DNFTYPFV++ACS L     G+
Sbjct: 91  EEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGV 150

Query: 381 VVHGEAFKVGVELDVFVGTSLIEFY 455
            +H   FK G+E DVFV   LI  Y
Sbjct: 151 QIHAHVFKAGLEGDVFVQNGLINMY 175


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  108 bits (270), Expect = 4e-22
 Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 2/149 (1%)
 Frame = +3

Query: 18  HLILNLLKFPGSVKTLNHLKSIHVHLLTTNLHQNSFAVGNFITHCAT--LGCMGYAAQVF 191
           H  L LL    + K+  +LK IH  ++ T LH   FA+   I  CA    G + YA  +F
Sbjct: 33  HPSLTLLS---TCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLF 89

Query: 192 DKMSEPNSFVWNTMIRGFQQNQEPRNALMLFDRMKVEGVSADNFTYPFVIRACSDLLEQC 371
           + + +PN F+WNTMIRG   +  P  A+  + RM + GV  +++T+PF++++C+ +    
Sbjct: 90  ESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQ 149

Query: 372 RGLVVHGEAFKVGVELDVFVGTSLIEFYS 458
            G  +HG   K+G+E D FV TSLI  Y+
Sbjct: 150 EGKQIHGHVLKLGLESDPFVHTSLINMYA 178