BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028809
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533340.1| nucleic acid binding protein, putative [Rici...   114   1e-23
ref|XP_002264308.1| PREDICTED: KH domain-containing protein At2g...   113   2e-23
emb|CAN61397.1| hypothetical protein VITISV_015779 [Vitis vinifera]   112   2e-23
ref|NP_181395.1| RNA-binding KH domain-containing protein [Arabi...   106   2e-21
ref|XP_003534621.1| PREDICTED: KH domain-containing protein At2g...   105   5e-21

>ref|XP_002533340.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223526820|gb|EEF29039.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 274

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/74 (72%), Positives = 63/74 (85%)
 Frame = -2

Query: 229 NFSPARTASPHITTNPDVESQQYLSELLQERQKLVPFMQVLPICTRLLNQEIMKLSRMIP 50
           NFSPAR  SPHI T PDV+S QYL+ELL+E QKL PF QVLPIC+RLLNQEI+++S MIP
Sbjct: 1   NFSPARALSPHIRTTPDVDSGQYLTELLEEHQKLGPFNQVLPICSRLLNQEILRVSGMIP 60

Query: 49  NQSFSDYDLMQRGS 8
           NQ FSD+D +QRGS
Sbjct: 61  NQGFSDFDRLQRGS 74


>ref|XP_002264308.1| PREDICTED: KH domain-containing protein At2g38610 [Vitis vinifera]
           gi|297745739|emb|CBI15795.3| unnamed protein product
           [Vitis vinifera]
          Length = 281

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/85 (68%), Positives = 67/85 (78%)
 Frame = -2

Query: 256 MSSFYNQNLNFSPARTASPHITTNPDVESQQYLSELLQERQKLVPFMQVLPICTRLLNQE 77
           MS  Y QN  FS AR  SPHI T PDVESQ YL+ELL E QKLVPFMQVLP+C+RLLNQE
Sbjct: 1   MSGLYTQN--FSSARALSPHIRTAPDVESQ-YLTELLAEYQKLVPFMQVLPVCSRLLNQE 57

Query: 76  IMKLSRMIPNQSFSDYDLMQRGSPN 2
           I+++S MIP Q F D+D +QRGSP+
Sbjct: 58  ILRVSSMIPKQGFGDFDRLQRGSPS 82


>emb|CAN61397.1| hypothetical protein VITISV_015779 [Vitis vinifera]
          Length = 281

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/85 (68%), Positives = 67/85 (78%)
 Frame = -2

Query: 256 MSSFYNQNLNFSPARTASPHITTNPDVESQQYLSELLQERQKLVPFMQVLPICTRLLNQE 77
           MS  Y QN  FS AR  SPHI T PDVESQ YL+ELL E QKLVPFMQVLP+C+RLLNQE
Sbjct: 1   MSGLYTQN--FSSARALSPHIRTAPDVESQ-YLTELLAEYQKLVPFMQVLPVCSRLLNQE 57

Query: 76  IMKLSRMIPNQSFSDYDLMQRGSPN 2
           I+++S MIP Q F D+D +QRGSP+
Sbjct: 58  ILRVSGMIPKQGFGDFDRLQRGSPS 82


>ref|NP_181395.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
           gi|30687577|ref|NP_850296.1| RNA-binding KH
           domain-containing protein [Arabidopsis thaliana]
           gi|297827443|ref|XP_002881604.1| KH domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|75268069|sp|Q9ZVI3.1|QKIL3_ARATH RecName: Full=KH
           domain-containing protein At2g38610; AltName:
           Full=Quaking-like protein 3 gi|3786011|gb|AAC67357.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|14596033|gb|AAK68744.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|17473662|gb|AAL38288.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|17978787|gb|AAL47387.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|23197752|gb|AAN15403.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|297327443|gb|EFH57863.1| KH domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|330254461|gb|AEC09555.1| RNA-binding KH
           domain-containing protein [Arabidopsis thaliana]
           gi|330254462|gb|AEC09556.1| RNA-binding KH
           domain-containing protein [Arabidopsis thaliana]
          Length = 286

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/85 (57%), Positives = 64/85 (75%)
 Frame = -2

Query: 256 MSSFYNQNLNFSPARTASPHITTNPDVESQQYLSELLQERQKLVPFMQVLPICTRLLNQE 77
           MS  YN +  FSPAR ASP I + P+++S QYL+ELL E QKL PFMQVLPIC+RLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 76  IMKLSRMIPNQSFSDYDLMQRGSPN 2
           + ++S M+ NQ F D+D ++  SP+
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPS 85


>ref|XP_003534621.1| PREDICTED: KH domain-containing protein At2g38610-like [Glycine
           max]
          Length = 281

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/85 (63%), Positives = 66/85 (77%)
 Frame = -2

Query: 256 MSSFYNQNLNFSPARTASPHITTNPDVESQQYLSELLQERQKLVPFMQVLPICTRLLNQE 77
           MS  YN N  FSPAR ASP I +NP+V+SQ YLSELL E QKL PFMQVLPIC+RLLNQE
Sbjct: 1   MSGLYNPN--FSPARAASPQIRSNPEVDSQ-YLSELLAEHQKLGPFMQVLPICSRLLNQE 57

Query: 76  IMKLSRMIPNQSFSDYDLMQRGSPN 2
           I+++S M+ NQ F D+D ++  SP+
Sbjct: 58  ILRVSGMLSNQGFGDFDRLRHRSPS 82