BLASTX nr result

ID: Bupleurum21_contig00028790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028790
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCI55449.1| PH01B001E05.5 [Phyllostachys edulis]                  119   4e-25
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   108   5e-22
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   106   3e-21
gb|AAM94550.1| putative lectin receptor kinase [Oryza sativa Jap...   102   4e-20
gb|AAP54120.2| retrotransposon protein, putative, Ty1-copia subc...   102   4e-20

>emb|CCI55449.1| PH01B001E05.5 [Phyllostachys edulis]
          Length = 303

 Score =  119 bits (298), Expect = 4e-25
 Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 5/166 (3%)
 Frame = -2

Query: 579 RALGEEINEPYVVKKLLRAVPSKFLQIVSTLEQFGDLETLSVEEAVGALKTHEERVKGNG 400
           R LG+++ E Y+V+K LRAV  KF  I ST+EQFGD++ +S++E +  LKTHEE  +   
Sbjct: 156 RGLGDKMEEVYIVRKFLRAVSRKFSPIASTIEQFGDIKNMSIKELIERLKTHEEGERRYS 215

Query: 399 KSDYNESQLVLTEEQWQKREASEG*SLLTREEWLKRSNKRNSDGPSSSFKPRAG-----Q 235
            SD ++  L                 LLTR EW  RS+K   +G S      +G      
Sbjct: 216 NSDGDDEHL-----------------LLTRTEWEARSSKHEGEGLSGGSSGGSGCWYRRV 258

Query: 234 DKSNLRCYNCSAYGHFAVDCRKPRRNREQREEINMAKFEDDEPALL 97
           DK+ +RC+NC+ Y HFA +CRKP + RE+ E   +    DDEPALL
Sbjct: 259 DKAKVRCFNCNDYRHFASECRKPNK-REKAEAYLIEADADDEPALL 303


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  108 bits (271), Expect = 5e-22
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 29/210 (13%)
 Frame = -2

Query: 576 ALGEEINEPYVVKKLLRAVPSKFLQIVSTLEQFGDLETLSVEEAVGALKTHEERV---KG 406
           ALG  +++  +VKKL   VP KF+ +V+ +EQF +++ +  EEAVG LK +EERV   K 
Sbjct: 145 ALGSTLSDSAMVKKLFDTVPEKFISLVAGIEQFYEIDNMPFEEAVGRLKAYEERVRKKKA 204

Query: 405 NGKSDYNESQLVLTEEQWQKREASEG*SLLTREEWLKRSNKRNSDGPS------------ 262
                  + Q++LT+ +W+ R   +G      E    + NK  SDG +            
Sbjct: 205 AAGGVTADGQVLLTQAEWEARFRKDG-----SESSSPQKNKPPSDGGNRAQGGRGRGRGR 259

Query: 261 -----SSFKPR---------AGQDKSNLRCYNCSAYGHFAVDCRKPRRNREQREEINMAK 124
                 S  PR          G+DKS+++CYNC  +GH++  C  P++   ++ E ++A+
Sbjct: 260 GGGGGRSSAPRNSGAGGSGGGGRDKSHIKCYNCEEFGHYSTQCPHPKK---KKVEAHLAQ 316

Query: 123 FEDDEPALLLAKCDKEKPRGMHLKEKQVVP 34
            +D  PALLLA  + E   G+ + E++V P
Sbjct: 317 TDDANPALLLAVTEDEPASGLVVHEERVWP 346


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
           gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
           Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  106 bits (264), Expect = 3e-21
 Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 24/204 (11%)
 Frame = -2

Query: 573 LGEEINEPYVVKKLLRAVPSKFLQIVSTLEQFGDLETLSVEEAVGALKTHEERV---KGN 403
           LG  +++  +VKKL   VP KF+ +V+ +EQF +++ +  EEAVG LK +EERV   K  
Sbjct: 146 LGSTLSDSAIVKKLFDTVPEKFISLVAGIEQFYEIDNMPFEEAVGRLKAYEERVRKKKAA 205

Query: 402 GKSDYNESQLVLTEEQWQ---KREASEG*SLLTREEWLKRSNKR---------NSDGPSS 259
                 + Q++LT+ +W+   +++ SE  S    +    R N+          +  G   
Sbjct: 206 AGGVTADGQVLLTQAEWEARFRKDGSESSSPQKNKPPSDRGNRAQGGRGRGRGHGGGGGR 265

Query: 258 SFKPR---------AGQDKSNLRCYNCSAYGHFAVDCRKPRRNREQREEINMAKFEDDEP 106
              PR          G+DKS+++CYNC  +GH++  C  P++   ++ E ++A+ +D  P
Sbjct: 266 GSAPRNSGAGGSGGGGRDKSHIKCYNCEEFGHYSTQCPHPKK---KKVEAHLAQTDDANP 322

Query: 105 ALLLAKCDKEKPRGMHLKEKQVVP 34
           ALLLA  + E   G+ + E++V P
Sbjct: 323 ALLLAVTEDEPASGLVVHEERVWP 346


>gb|AAM94550.1| putative lectin receptor kinase [Oryza sativa Japonica Group]
          Length = 594

 Score =  102 bits (255), Expect = 4e-20
 Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
 Frame = -2

Query: 579 RALGEEINEPYVVKKLLRAVPSKFLQIVSTLEQFGDLETLSVEEAVGALKTHEERVK-GN 403
           R LG+ + E  VV+K LR VPS+F+Q+   +EQ  DL+TLS+EE  G L+T EER + G+
Sbjct: 459 RMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDLKTLSIEEVTGRLRTVEERYRPGD 518

Query: 402 GKSDYNESQLVLTEEQWQKREASEG*SLLTREEWLKRSNKRNSDGPSSSFKPRAGQDKSN 223
                +  +L+LTEEQW +R               +R+ K+N D    +F      DKS 
Sbjct: 519 NDGGVDGGRLLLTEEQWLER---------------RRNRKKNGD----TF------DKSK 553

Query: 222 LRCYNCSAYGHFAVD--CRKPRRNREQREEINMAKFEDDEPALL 97
           +RCYNC  YGH++ +  C + ++N +    +  A   DDEP LL
Sbjct: 554 VRCYNCQEYGHYSWEKKCHETKKNHQAHLVVADA---DDEPTLL 594



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
 Frame = -2

Query: 579 RALGEEINEPYVVKKLLRAVPSKFLQIVSTLEQFGDLETLSVEEAVGALKTHEERVK-GN 403
           R LG+ + E  VV+K LR VPS+F+Q+   +EQ  DL+TLS+EE  G L+T EER + G+
Sbjct: 192 RMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDLKTLSIEEVTGRLRTVEERYRPGD 251

Query: 402 GKSDYNESQLVLTEEQWQKREASEG*SLLTREEWLKRSNKRNSDGPSSSFKPRAGQDKSN 223
                +  +L+LTEEQW +R               +R+ K+N D    +F      DKS 
Sbjct: 252 NDGGVDGGRLLLTEEQWLER---------------RRNRKKNGD----TF------DKSK 286

Query: 222 LRCYNCSAYGHFA 184
           +RCYNC  YGH++
Sbjct: 287 VRCYNCQEYGHYS 299


>gb|AAP54120.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 609

 Score =  102 bits (255), Expect = 4e-20
 Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
 Frame = -2

Query: 579 RALGEEINEPYVVKKLLRAVPSKFLQIVSTLEQFGDLETLSVEEAVGALKTHEERVK-GN 403
           R LG+ + E  VV+K LR VPS+F+Q+   +EQ  DL+TLS+EE  G L+T EER + G+
Sbjct: 474 RMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDLKTLSIEEVTGRLRTVEERYRPGD 533

Query: 402 GKSDYNESQLVLTEEQWQKREASEG*SLLTREEWLKRSNKRNSDGPSSSFKPRAGQDKSN 223
                +  +L+LTEEQW +R               +R+ K+N D    +F      DKS 
Sbjct: 534 NDGGVDGGRLLLTEEQWLER---------------RRNRKKNGD----TF------DKSK 568

Query: 222 LRCYNCSAYGHFAVD--CRKPRRNREQREEINMAKFEDDEPALL 97
           +RCYNC  YGH++ +  C + ++N +    +  A   DDEP LL
Sbjct: 569 VRCYNCQEYGHYSWEKKCHETKKNHQAHLVVADA---DDEPTLL 609



 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
 Frame = -2

Query: 579 RALGEEINEPYVVKKLLRAVPSKFLQIVSTLEQFGDLETLSVEEAVGALKTHEERVK-GN 403
           R LG+ + E  VV+K LR VPS+F+Q+   +EQ  DL+TLS+EE  G L+T EER + G+
Sbjct: 192 RMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDLKTLSIEEVTGRLRTVEERYRPGD 251

Query: 402 GKSDYNESQLVLTEEQWQKREASEG*SLLTREEWLKRSNKRNSD 271
                +  +L+LTEEQW +R               +R+ K+N D
Sbjct: 252 NDGGVDGGRLLLTEEQWLER---------------RRNRKKNGD 280


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