BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028233
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...   294   4e-78
ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...   293   1e-77
ref|XP_002520332.1| pentatricopeptide repeat-containing protein,...   277   7e-73
ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l...   262   2e-68
ref|NP_177865.2| pentatricopeptide repeat-containing protein [Ar...   262   2e-68

>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score =  294 bits (753), Expect = 4e-78
 Identities = 137/157 (87%), Positives = 149/157 (94%)
 Frame = -3

Query: 473 RREDGGLVTTATVTCLIKVLGEEGLVDEALAAFYRMKQFHCKQDVYAYNTVITALCRVGN 294
           RRE+GGLVTTAT+TCLIKVLGEEGLV+EAL AFYRMKQFHCK DVYAYNTVI  LCR+GN
Sbjct: 162 RRENGGLVTTATITCLIKVLGEEGLVNEALTAFYRMKQFHCKPDVYAYNTVINVLCRIGN 221

Query: 293 FRKAKFLLEQMELPGFRCPPDTYTYTILISAYCKHSLQTGCRKAIRRRLWEANHLFRIML 114
           F+KA+FLLEQMELPGFRCPPD +TYTILIS+YCK+SLQTGCRKAIRRRLWEANHLFRIML
Sbjct: 222 FKKARFLLEQMELPGFRCPPDIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIML 281

Query: 113 FKGFVPDVVTYNCLIDGCCKTYRIERAVELFDDMVKR 3
           FKGF PDVVTYN LIDGCCKTYRI+RA+ELF+DM KR
Sbjct: 282 FKGFSPDVVTYNSLIDGCCKTYRIQRALELFEDMSKR 318


>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score =  293 bits (750), Expect = 1e-77
 Identities = 135/157 (85%), Positives = 149/157 (94%)
 Frame = -3

Query: 473 RREDGGLVTTATVTCLIKVLGEEGLVDEALAAFYRMKQFHCKQDVYAYNTVITALCRVGN 294
           R+   G+VTTAT+TCL+KVLGEEGL ++ALAAFYRMKQFHCK DVYAYNT+I ALCRVGN
Sbjct: 148 RKGGNGVVTTATITCLMKVLGEEGLANQALAAFYRMKQFHCKPDVYAYNTIIYALCRVGN 207

Query: 293 FRKAKFLLEQMELPGFRCPPDTYTYTILISAYCKHSLQTGCRKAIRRRLWEANHLFRIML 114
           FRKA+FLLEQMELPGFRCPPD++TYTILI +YCK+SLQTGCRKA+RRRLWEANHLFRIML
Sbjct: 208 FRKARFLLEQMELPGFRCPPDSFTYTILIGSYCKYSLQTGCRKAVRRRLWEANHLFRIML 267

Query: 113 FKGFVPDVVTYNCLIDGCCKTYRIERAVELFDDMVKR 3
           FKGFVPDVVTYNCLIDGCCKTYRIERA+ELFDDM KR
Sbjct: 268 FKGFVPDVVTYNCLIDGCCKTYRIERALELFDDMNKR 304


>ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540551|gb|EEF42118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  277 bits (708), Expect = 7e-73
 Identities = 127/151 (84%), Positives = 142/151 (94%)
 Frame = -3

Query: 455 LVTTATVTCLIKVLGEEGLVDEALAAFYRMKQFHCKQDVYAYNTVITALCRVGNFRKAKF 276
           LVTT  VTCLIKVLGEEGLV EAL+ FYRMK++HCK DVYAYNT+I ALCR+GNF+KA++
Sbjct: 163 LVTTNAVTCLIKVLGEEGLVKEALSLFYRMKKYHCKPDVYAYNTIIYALCRIGNFKKARY 222

Query: 275 LLEQMELPGFRCPPDTYTYTILISAYCKHSLQTGCRKAIRRRLWEANHLFRIMLFKGFVP 96
           LLEQMELPGF CPPDT+TYTI+IS+YCK+SLQTGCRKAIRRRLWEANHLFRIMLFKGF P
Sbjct: 223 LLEQMELPGFYCPPDTFTYTIMISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFAP 282

Query: 95  DVVTYNCLIDGCCKTYRIERAVELFDDMVKR 3
           DVVTYNCLIDGCCKTYRIERA+ELF+DM +R
Sbjct: 283 DVVTYNCLIDGCCKTYRIERALELFEDMNRR 313


>ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score =  262 bits (669), Expect = 2e-68
 Identities = 120/155 (77%), Positives = 141/155 (90%), Gaps = 1/155 (0%)
 Frame = -3

Query: 473 RREDG-GLVTTATVTCLIKVLGEEGLVDEALAAFYRMKQFHCKQDVYAYNTVITALCRVG 297
           RRE+G  +VTTA++TCL+K LGEEG V EALA FYRMK++HCK DVYAYNT+I ALCRVG
Sbjct: 155 RRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVG 214

Query: 296 NFRKAKFLLEQMELPGFRCPPDTYTYTILISAYCKHSLQTGCRKAIRRRLWEANHLFRIM 117
           NF+KA+FLL+QM+LPGFR PPDTYTYTILIS+YC++ +QTGCRKAIRRR+WEAN +FR M
Sbjct: 215 NFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREM 274

Query: 116 LFKGFVPDVVTYNCLIDGCCKTYRIERAVELFDDM 12
           LF+GFVPDVVTYNCLIDGCCKT RI RA+ELF+DM
Sbjct: 275 LFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDM 309


>ref|NP_177865.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122244095|sp|Q1PFC5.1|PP130_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77405 gi|91806103|gb|ABE65780.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332197853|gb|AEE35974.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 458

 Score =  262 bits (669), Expect = 2e-68
 Identities = 120/155 (77%), Positives = 141/155 (90%), Gaps = 1/155 (0%)
 Frame = -3

Query: 473 RREDG-GLVTTATVTCLIKVLGEEGLVDEALAAFYRMKQFHCKQDVYAYNTVITALCRVG 297
           RRE+G  +VTTA++TCL+K LGEEG V EALA FYRMK++HCK DVYAYNT+I ALCRVG
Sbjct: 155 RRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVG 214

Query: 296 NFRKAKFLLEQMELPGFRCPPDTYTYTILISAYCKHSLQTGCRKAIRRRLWEANHLFRIM 117
           NF+KA+FLL+QM+LPGFR PPDTYTYTILIS+YC++ +QTGCRKAIRRR+WEAN +FR M
Sbjct: 215 NFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREM 274

Query: 116 LFKGFVPDVVTYNCLIDGCCKTYRIERAVELFDDM 12
           LF+GFVPDVVTYNCLIDGCCKT RI RA+ELF+DM
Sbjct: 275 LFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDM 309