BLASTX nr result

ID: Bupleurum21_contig00028031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028031
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266...   145   3e-33
ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycin...   144   6e-33
ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycin...   144   6e-33
ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_002303427.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32

>ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266124 [Vitis vinifera]
          Length = 541

 Score =  145 bits (366), Expect = 3e-33
 Identities = 78/124 (62%), Positives = 92/124 (74%)
 Frame = -2

Query: 374 KKRKRDDIEADYEAKRYGEVVVKXXXXXXXXXXXXXXEKRKTMDTGVDMVDSEEGFDDED 195
           KKRKRD+IE +YEA+ YG V                 EKRK++    +M+ S+EGFDDE 
Sbjct: 159 KKRKRDEIEEEYEAQHYGTVA----------KVEGVGEKRKSVVNPAEMLVSKEGFDDES 208

Query: 194 KLLRTVFVGNLSMKVKKKALLKEFSQFGEVDSVRIRSVPIMDSKTPRKGAIIKKEFNDAV 15
           KLLRTVFVGNL +K+KKKALLKEFS FGEV SVRIRSVPI+DSK PRKGAII K+ ND+V
Sbjct: 209 KLLRTVFVGNLPLKIKKKALLKEFSVFGEVQSVRIRSVPILDSKKPRKGAIISKKINDSV 268

Query: 14  DNVH 3
           D+VH
Sbjct: 269 DSVH 272


>ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 519

 Score =  144 bits (364), Expect = 6e-33
 Identities = 75/124 (60%), Positives = 90/124 (72%)
 Frame = -2

Query: 374 KKRKRDDIEADYEAKRYGEVVVKXXXXXXXXXXXXXXEKRKTMDTGVDMVDSEEGFDDED 195
           +KRKR ++E D+E K+YG V                  KRKT+D   DM+ S+EGFDDED
Sbjct: 137 RKRKRGEVEKDWEEKKYGIV-------EEGLENKTVGIKRKTLDDPADMMVSKEGFDDED 189

Query: 194 KLLRTVFVGNLSMKVKKKALLKEFSQFGEVDSVRIRSVPIMDSKTPRKGAIIKKEFNDAV 15
           KLLRTVFVGNL +KVKKK LLKEF +FGEV+SVRIRSVPI D+K PRKGAI+ K+ NDA 
Sbjct: 190 KLLRTVFVGNLPLKVKKKTLLKEFKKFGEVESVRIRSVPIQDTKKPRKGAILAKKINDAA 249

Query: 14  DNVH 3
           D+VH
Sbjct: 250 DSVH 253


>ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 515

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/124 (59%), Positives = 91/124 (73%)
 Frame = -2

Query: 374 KKRKRDDIEADYEAKRYGEVVVKXXXXXXXXXXXXXXEKRKTMDTGVDMVDSEEGFDDED 195
           +KRKRD++E ++E K+YG V                  KRKT+D   DM+ S+EGFD+ED
Sbjct: 133 RKRKRDEVEKEWEEKKYGAV-------EEGIENKTVGIKRKTLDDPADMMVSKEGFDNED 185

Query: 194 KLLRTVFVGNLSMKVKKKALLKEFSQFGEVDSVRIRSVPIMDSKTPRKGAIIKKEFNDAV 15
           KLLRTVFVGNL +KVKKK LLKEF +FGEV+SVRIRSVPI D+K PRKGAI+ K+ NDA 
Sbjct: 186 KLLRTVFVGNLPLKVKKKTLLKEFKKFGEVESVRIRSVPIQDTKKPRKGAILAKKINDAA 245

Query: 14  DNVH 3
           D+VH
Sbjct: 246 DSVH 249


>ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|222833855|gb|EEE72332.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  143 bits (361), Expect = 1e-32
 Identities = 77/126 (61%), Positives = 92/126 (73%), Gaps = 2/126 (1%)
 Frame = -2

Query: 374 KKRKRDDIEADYEAKRYGEVVVKXXXXXXXXXXXXXXEKRKTMDTGVDMVDSEE--GFDD 201
           KKRKRDD+E +YEAK+YG VV                 KRK  D   D++ S+E  GFDD
Sbjct: 104 KKRKRDDLEREYEAKKYGPVV-----DNEENASVVVGAKRKNTDDAADVLVSKESEGFDD 158

Query: 200 EDKLLRTVFVGNLSMKVKKKALLKEFSQFGEVDSVRIRSVPIMDSKTPRKGAIIKKEFND 21
           E KLLRTVFVGNL +KVKKK L+KEFS+FG+V+SVRIRSVPI +SK PRKGAI+ K+FND
Sbjct: 159 ESKLLRTVFVGNLPLKVKKKTLIKEFSKFGDVESVRIRSVPIAESKIPRKGAILLKKFND 218

Query: 20  AVDNVH 3
            VD+VH
Sbjct: 219 NVDSVH 224


>ref|XP_002303427.1| predicted protein [Populus trichocarpa] gi|222840859|gb|EEE78406.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  142 bits (357), Expect = 4e-32
 Identities = 76/126 (60%), Positives = 93/126 (73%), Gaps = 2/126 (1%)
 Frame = -2

Query: 374 KKRKRDDIEADYEAKRYGEVVVKXXXXXXXXXXXXXXEKRKTMDTGVDMVDSEEG--FDD 201
           KKRKRDD+E++YEAK+YG VV                 KRK  D   D++ S+EG  FDD
Sbjct: 108 KKRKRDDLESEYEAKKYGPVV-----NNEENVRVVVGAKRKKADDAADVLVSKEGEGFDD 162

Query: 200 EDKLLRTVFVGNLSMKVKKKALLKEFSQFGEVDSVRIRSVPIMDSKTPRKGAIIKKEFND 21
           E KLLRTVFVGNL +KVKKKAL+KEFS+FGEV+S+RIRS+PI +SK PRKGAI+ K+FND
Sbjct: 163 ERKLLRTVFVGNLPLKVKKKALIKEFSKFGEVESLRIRSMPITESKIPRKGAILLKKFND 222

Query: 20  AVDNVH 3
             D+VH
Sbjct: 223 NADSVH 228


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