BLASTX nr result

ID: Bupleurum21_contig00028000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028000
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312052.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002315267.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
ref|XP_002525054.1| run and tbc1 domain containing 3, plant, put...   170   1e-40
ref|XP_002281489.1| PREDICTED: uncharacterized protein LOC100255...   169   2e-40
ref|XP_002525202.1| run and tbc1 domain containing 3, plant, put...   167   8e-40

>ref|XP_002312052.1| predicted protein [Populus trichocarpa] gi|222851872|gb|EEE89419.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  172 bits (435), Expect = 3e-41
 Identities = 88/121 (72%), Positives = 109/121 (90%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 ETALMEIAKDDNR-QLTARIEQLEQEINELRQALDDKKEQENVMLQVLMRVEGEQRLAEE 186
           ETALME+ K DNR QL+AR+EQLEQE++ELR+AL DK+EQEN MLQVLMRVE +Q++ E+
Sbjct: 606 ETALMEMVKQDNRRQLSARVEQLEQEVSELRRALADKQEQENAMLQVLMRVEQDQKVTED 665

Query: 185 ARLSAEQDASAQRYAVQVIQEKYEQAMASISQLEKRVVTAESMLEATLQYESDQVKAQSS 6
           AR+ AEQDA+AQRYA QV+QEKYEQA+AS++++EKRVV AESMLEATLQY+S Q+KAQ S
Sbjct: 666 ARIYAEQDAAAQRYAAQVLQEKYEQAIASLAEMEKRVVMAESMLEATLQYQSGQLKAQPS 725

Query: 5   P 3
           P
Sbjct: 726 P 726


>ref|XP_002315267.1| predicted protein [Populus trichocarpa] gi|222864307|gb|EEF01438.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score =  171 bits (432), Expect = 7e-41
 Identities = 87/121 (71%), Positives = 109/121 (90%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 ETALMEIAKDDNR-QLTARIEQLEQEINELRQALDDKKEQENVMLQVLMRVEGEQRLAEE 186
           ETALME+ K DNR QL+AR+EQL+QE++ELR+AL DK+EQEN MLQVLMRVE EQ++ E+
Sbjct: 616 ETALMEMVKQDNRRQLSARVEQLDQEVSELRRALADKQEQENAMLQVLMRVEQEQKVTED 675

Query: 185 ARLSAEQDASAQRYAVQVIQEKYEQAMASISQLEKRVVTAESMLEATLQYESDQVKAQSS 6
           AR+ AEQDASAQR+A QV+QEKYEQA+AS++++EKR+V AESMLEATLQY+S Q+KAQ S
Sbjct: 676 ARIYAEQDASAQRFAAQVLQEKYEQALASLAEMEKRMVMAESMLEATLQYQSGQLKAQPS 735

Query: 5   P 3
           P
Sbjct: 736 P 736


>ref|XP_002525054.1| run and tbc1 domain containing 3, plant, putative [Ricinus
           communis] gi|223535635|gb|EEF37301.1| run and tbc1
           domain containing 3, plant, putative [Ricinus communis]
          Length = 845

 Score =  170 bits (430), Expect = 1e-40
 Identities = 87/121 (71%), Positives = 108/121 (89%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 ETALMEIAKDDNR-QLTARIEQLEQEINELRQALDDKKEQENVMLQVLMRVEGEQRLAEE 186
           ETALME+ K DNR QL+AR+EQLEQE++EL++AL DK+EQENVMLQVLMRVE EQ++ E+
Sbjct: 614 ETALMEMVKQDNRRQLSARVEQLEQEVSELQRALSDKQEQENVMLQVLMRVEQEQKVTED 673

Query: 185 ARLSAEQDASAQRYAVQVIQEKYEQAMASISQLEKRVVTAESMLEATLQYESDQVKAQSS 6
           AR  AEQDA+AQRYA QV+QEKYE+A+AS++++EKR V AESMLEATLQY+S Q+KAQ S
Sbjct: 674 ARRYAEQDAAAQRYAAQVLQEKYEEALASLAEMEKRAVMAESMLEATLQYQSGQLKAQPS 733

Query: 5   P 3
           P
Sbjct: 734 P 734


>ref|XP_002281489.1| PREDICTED: uncharacterized protein LOC100255322 [Vitis vinifera]
           gi|297736455|emb|CBI25326.3| unnamed protein product
           [Vitis vinifera]
          Length = 830

 Score =  169 bits (428), Expect = 2e-40
 Identities = 88/121 (72%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 ETALMEIAKDDNR-QLTARIEQLEQEINELRQALDDKKEQENVMLQVLMRVEGEQRLAEE 186
           ETALME+ K DNR QL+AR+EQLEQE++ELRQAL DK+EQE+ MLQVL+RVE EQ+L E+
Sbjct: 626 ETALMEMVKQDNRRQLSARVEQLEQEVSELRQALADKQEQEHAMLQVLVRVEQEQKLTED 685

Query: 185 ARLSAEQDASAQRYAVQVIQEKYEQAMASISQLEKRVVTAESMLEATLQYESDQVKAQSS 6
           AR  AEQDA+AQRYA QV+QEKYE+A+ S++Q+EKRVV AE+MLEATLQY+S QVKAQ S
Sbjct: 686 ARRFAEQDAAAQRYAAQVLQEKYEEAITSLAQMEKRVVMAETMLEATLQYQSGQVKAQPS 745

Query: 5   P 3
           P
Sbjct: 746 P 746


>ref|XP_002525202.1| run and tbc1 domain containing 3, plant, putative [Ricinus communis]
            gi|223535499|gb|EEF37168.1| run and tbc1 domain
            containing 3, plant, putative [Ricinus communis]
          Length = 894

 Score =  167 bits (423), Expect = 8e-40
 Identities = 87/121 (71%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362  ETALMEIAKDDNR-QLTARIEQLEQEINELRQALDDKKEQENVMLQVLMRVEGEQRLAEE 186
            ETA ME+ K+DNR QL+A+IEQLEQE+ +L+QAL DK+EQE  MLQVLMRVE EQR+ EE
Sbjct: 711  ETAFMEMVKEDNRRQLSAKIEQLEQEVADLQQALSDKREQEAAMLQVLMRVEQEQRITEE 770

Query: 185  ARLSAEQDASAQRYAVQVIQEKYEQAMASISQLEKRVVTAESMLEATLQYESDQVKAQSS 6
            AR+ AE+DA+AQRYA+ V+Q+KYE+AMAS++Q+E+RVV AESMLEATLQYES Q KAQSS
Sbjct: 771  ARVRAERDAAAQRYALTVLQQKYEKAMASVTQMEQRVVMAESMLEATLQYESGQSKAQSS 830

Query: 5    P 3
            P
Sbjct: 831  P 831


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