BLASTX nr result

ID: Bupleurum21_contig00027989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027989
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
ref|XP_002280862.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    87   1e-15
ref|XP_003635549.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    86   2e-15
ref|XP_003632011.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...    86   2e-15
emb|CBI23596.3| unnamed protein product [Vitis vinifera]               86   2e-15

>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 45/86 (52%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
 Frame = -1

Query: 256 MVGNGKADVVAATTNEVNYDRKSELKAFDDTKAGVKGLVDAGIKNIPRIFIHPEDDLKD- 80
           MVG+G+A  ++    E +YDR SELKAFD+TKAGVKGLVDAG+  +P+IFIHP + L+  
Sbjct: 1   MVGSGRAAEISV--QETSYDRGSELKAFDETKAGVKGLVDAGVSKVPQIFIHPSERLEHR 58

Query: 79  SISTSKEQFKFPIIDMDGVDEDHIRQ 2
           ++STSK      +ID++ +D+D IR+
Sbjct: 59  TLSTSKNPVNVTVIDLEAIDKDPIRR 84


>ref|XP_002280862.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Vitis vinifera]
          Length = 319

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
 Frame = -1

Query: 232 VVAATTN-EVNYDRKSELKAFDDTKAGVKGLVDAGIKNIPRIFIHPEDDLKDSISTSKEQ 56
           VV +TT    +YDR SELKAFD++KAGVKGLVDAG+  +PR+FI P D+L+    T   Q
Sbjct: 2   VVTSTTKFSEDYDRASELKAFDESKAGVKGLVDAGVSKVPRMFIQPPDNLR----TCNTQ 57

Query: 55  FKFPIIDMDGVDEDHIRQ 2
           F FP+ID+ G+D D IR+
Sbjct: 58  FNFPVIDLHGMDNDPIRR 75


>ref|XP_003635549.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Vitis vinifera]
          Length = 368

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/65 (60%), Positives = 52/65 (80%)
 Frame = -1

Query: 202 YDRKSELKAFDDTKAGVKGLVDAGIKNIPRIFIHPEDDLKDSISTSKEQFKFPIIDMDGV 23
           YDRKSEL AFDD+KAGVKGLVDAG+  IPR+FIHP+ +L++   ++  Q + PIID++GV
Sbjct: 14  YDRKSELIAFDDSKAGVKGLVDAGVAKIPRMFIHPQHNLREKSVSTNAQLRIPIIDLEGV 73

Query: 22  DEDHI 8
           + D I
Sbjct: 74  NSDAI 78


>ref|XP_003632011.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Vitis vinifera]
          Length = 362

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/79 (53%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
 Frame = -1

Query: 232 VVAATTNEVN--YDRKSELKAFDDTKAGVKGLVDAGIKNIPRIFIHPEDDLKDSISTSKE 59
           +VA   +E++  YDR SELKAFD++KAGVKG+VDAG+  +PR+FI P D+L+    T   
Sbjct: 1   MVATCASEISEEYDRASELKAFDESKAGVKGIVDAGVSKVPRMFIQPPDNLR----TCSP 56

Query: 58  QFKFPIIDMDGVDEDHIRQ 2
           QF FP+ID+ G+D D IR+
Sbjct: 57  QFNFPVIDLHGMDSDPIRR 75


>emb|CBI23596.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/65 (60%), Positives = 52/65 (80%)
 Frame = -1

Query: 202 YDRKSELKAFDDTKAGVKGLVDAGIKNIPRIFIHPEDDLKDSISTSKEQFKFPIIDMDGV 23
           YDRKSEL AFDD+KAGVKGLVDAG+  IPR+FIHP+ +L++   ++  Q + PIID++GV
Sbjct: 5   YDRKSELIAFDDSKAGVKGLVDAGVAKIPRMFIHPQHNLREKSVSTNAQLRIPIIDLEGV 64

Query: 22  DEDHI 8
           + D I
Sbjct: 65  NSDAI 69


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