BLASTX nr result

ID: Bupleurum21_contig00027983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027983
         (1520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23170.3| unnamed protein product [Vitis vinifera]              686   0.0  
ref|XP_004155668.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   630   e-178
ref|XP_004134969.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   619   e-175
ref|XP_002873711.1| hypothetical protein ARALYDRAFT_488358 [Arab...   617   e-174
dbj|BAK06716.1| predicted protein [Hordeum vulgare subsp. vulgare]    591   e-166

>emb|CBI23170.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  686 bits (1770), Expect = 0.0
 Identities = 336/518 (64%), Positives = 411/518 (79%), Gaps = 25/518 (4%)
 Frame = +3

Query: 42   SVPQIGFLIPLNDKLEENNLNPKIPILNGSNSVGRDSIPVADKRLSRKHICIIASPNASA 221
            S+ QIGFL+PLN  LEE+   PK+PI  G+N +GR+SI V+DKRLSRKH+ +IAS N S 
Sbjct: 2    SLSQIGFLVPLNRNLEEDTSTPKLPIPTGANVIGRNSISVSDKRLSRKHLTLIASGNGSV 61

Query: 222  HLHVEGSNPVVVRSNNQRKKLLSRESHMITDGDVIELIPGHHFFRFVAERNNLALISQKR 401
               VEG+NPVVV S NQRKKL + E  +IT+ D+IELIPGH+FF++V          +K+
Sbjct: 62   DAVVEGTNPVVVASGNQRKKLRTGEKAVITNDDIIELIPGHYFFKYVTVAGEKC---EKK 118

Query: 402  DNDQGNRVGEEDE-SVSRKRKKQVLQDEVFAKNLQAELNNNIPMR--------------- 533
             N    +  E +E S+SRKR +QV +DE FA+ LQAE+ N++ ++               
Sbjct: 119  GNSMDAQNMESNEVSLSRKRMRQVSEDEAFARKLQAEMENDVLVQERSLVTGKSGYSQAS 178

Query: 534  ---------STEAIRYFCPAIDKLSSTFRLMKVKGLPPWANTNAVSIGDVIHGNVLVAIL 686
                     ++EAIR+F    D L  T+RL++VK LP WANT++VSI DVI G+VL+A+L
Sbjct: 179  TASIPSSHMNSEAIRHFSIPKDNLPLTYRLLRVKDLPAWANTSSVSIRDVIQGDVLIAVL 238

Query: 687  SNYMVDIDWLTSACTTLNEVPHVLVIHGEGDGTLEYMKRKKPANWLLHKPPLPISYGTHH 866
            SNYMVDIDWL S+C TL ++PHVLVIHGEGDGTL++MK+ KP NW+LHKPPLPIS+GTHH
Sbjct: 239  SNYMVDIDWLLSSCPTLAKIPHVLVIHGEGDGTLDHMKKNKPPNWILHKPPLPISFGTHH 298

Query: 867  SKAMLLVYPQGVRVIIHTANLIYVDWNNKSQGLWMQDFPWKNSNTSNKGCGFESDLVDYL 1046
            SKAMLLVYP+GVRVI+HTANLIYVDWNNKSQGLWMQDFPWK     +KGC FE+DL+DYL
Sbjct: 299  SKAMLLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKVQKELSKGCAFENDLIDYL 358

Query: 1047 SALKLPEFSASLPVLGNCSINASFFKRFDYSSATVRLIASVPGYHSGSSLKKWGHMKLRT 1226
            S LK PEF+A+LP LG+ +IN+SFFK+FDYS+A VRLIASVPGYH+GS+LKKWGHMKL +
Sbjct: 359  SVLKWPEFTANLPALGSFNINSSFFKKFDYSNAVVRLIASVPGYHTGSNLKKWGHMKLCS 418

Query: 1227 VLQESIFDQQFRKAPLVYQFSSLGSLDEKWMAELASSMSSGVSEDKVPLGVGEPLIVWPS 1406
            VLQE IFD++F+K+PL YQFSSLGSLDEKWM ELASSMSSG  +DK PLG+G+PLI+WP+
Sbjct: 419  VLQECIFDKEFQKSPLAYQFSSLGSLDEKWMTELASSMSSGSCDDKTPLGLGKPLIIWPT 478

Query: 1407 VEDVRCSLEGYAAGNAIPSPEKNVEKEFLKKYWAKWKA 1520
            VEDVRCSLEGYAAGNAIPSP+KNVEKEFLKKYWAKWKA
Sbjct: 479  VEDVRCSLEGYAAGNAIPSPQKNVEKEFLKKYWAKWKA 516


>ref|XP_004155668.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Cucumis sativus]
          Length = 959

 Score =  630 bits (1624), Expect = e-178
 Identities = 309/502 (61%), Positives = 385/502 (76%), Gaps = 12/502 (2%)
 Frame = +3

Query: 51   QIGFLIPLNDKLEENNLNPKIPILNGSNSVGRDSIPVADKRLSRKHICIIASPNASAHLH 230
            ++G+L+PL+  LE +N   KI +  G NS+GR ++ V++KR+SRKHI +  S + SA L 
Sbjct: 318  KVGYLVPLDKNLEVDNSGLKIRLSEGPNSIGRSNVLVSEKRISRKHITLTTSTDGSAKLL 377

Query: 231  VEGSNPVVVRSNNQRKKLLSRESHMITDGDVIELIPGHHFFRFVAERNNLALISQKRDND 410
            V+G+NPVV+ S + RKKL  RES +I DGDVIELIPGH+ F++ +   N           
Sbjct: 378  VDGTNPVVINSGDGRKKLGPRESVIIRDGDVIELIPGHYPFKYASHCFN----------- 426

Query: 411  QGNRVGEEDESVSRKRKKQVLQDEVFAK------------NLQAELNNNIPMRSTEAIRY 554
              +R G ED  + +KR +QV  D++  +            N+Q+  + +    S EAIR 
Sbjct: 427  --SRPGSED--LGQKRVRQVAHDKISERVAKRAEMGSPLENMQSGSSKSKEANSVEAIRN 482

Query: 555  FCPAIDKLSSTFRLMKVKGLPPWANTNAVSIGDVIHGNVLVAILSNYMVDIDWLTSACTT 734
            F    D+L  TFRL+ VKGLPPWANT+ V I D+I G++L A+LSNYMVDIDWL  AC T
Sbjct: 483  FHIPDDRLPMTFRLLSVKGLPPWANTSCVRITDIIQGDILFAVLSNYMVDIDWLIPACPT 542

Query: 735  LNEVPHVLVIHGEGDGTLEYMKRKKPANWLLHKPPLPISYGTHHSKAMLLVYPQGVRVII 914
            L ++P VLVIHGEGDGTL+ MKRKKPANW+LHKPPLPIS+GTHHSKA+ LVYP+G+R+++
Sbjct: 543  LAKIPQVLVIHGEGDGTLDNMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVV 602

Query: 915  HTANLIYVDWNNKSQGLWMQDFPWKNSNTSNKGCGFESDLVDYLSALKLPEFSASLPVLG 1094
            HTANLIYVDWNNKSQGLWMQDFPWK+ N+S++GC FE DLVDYLSALK PEF AS P  G
Sbjct: 603  HTANLIYVDWNNKSQGLWMQDFPWKDQNSSSRGCAFEDDLVDYLSALKWPEFPASFPGHG 662

Query: 1095 NCSINASFFKRFDYSSATVRLIASVPGYHSGSSLKKWGHMKLRTVLQESIFDQQFRKAPL 1274
            N +IN  FF++FDYS A VRLIASVPGYH+G  LKKWGHMKLR+VLQE IFD++F+++PL
Sbjct: 663  NFNINPYFFRKFDYSKAAVRLIASVPGYHTGRYLKKWGHMKLRSVLQECIFDKEFQRSPL 722

Query: 1275 VYQFSSLGSLDEKWMAELASSMSSGVSEDKVPLGVGEPLIVWPSVEDVRCSLEGYAAGNA 1454
            VYQFSSLGSL+EKWMAE A+S+SSG + DK PLG+GEPLIVWP+VEDVRCSLEGYAAG+A
Sbjct: 723  VYQFSSLGSLNEKWMAEFAASLSSGFTPDKTPLGLGEPLIVWPTVEDVRCSLEGYAAGSA 782

Query: 1455 IPSPEKNVEKEFLKKYWAKWKA 1520
            IPSP KNVEK FL+KYWAKW +
Sbjct: 783  IPSPLKNVEKGFLRKYWAKWNS 804


>ref|XP_004134969.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Cucumis sativus]
          Length = 613

 Score =  619 bits (1596), Expect = e-175
 Identities = 308/490 (62%), Positives = 374/490 (76%)
 Frame = +3

Query: 51   QIGFLIPLNDKLEENNLNPKIPILNGSNSVGRDSIPVADKRLSRKHICIIASPNASAHLH 230
            Q+G+L+PL+  LE +N   KI +  G NS+GR ++ V++KR+SRKHI +  S + SA L 
Sbjct: 5    QVGYLVPLDKNLEVDNSGLKIRLSEGPNSIGRSNVLVSEKRISRKHITLTTSTDGSAKLL 64

Query: 231  VEGSNPVVVRSNNQRKKLLSRESHMITDGDVIELIPGHHFFRFVAERNNLALISQKRDND 410
            VEG+NPVV+ S + RKKL  RES +I DGDVIELIPGH+ F++ +   N           
Sbjct: 65   VEGTNPVVINSGDGRKKLGPRESVIIRDGDVIELIPGHYPFKYASHCFN----------- 113

Query: 411  QGNRVGEEDESVSRKRKKQVLQDEVFAKNLQAELNNNIPMRSTEAIRYFCPAIDKLSSTF 590
              +R G ED  + +KR +Q             E N      S EAIR F    D+L  TF
Sbjct: 114  --SRPGSED--LGQKRVRQ-------------EAN------SVEAIRNFHIPDDRLPMTF 150

Query: 591  RLMKVKGLPPWANTNAVSIGDVIHGNVLVAILSNYMVDIDWLTSACTTLNEVPHVLVIHG 770
            RL+ VKGLPPWANT+ V I D+I G++L A+LSNYMVDIDWL  AC  L +VP VLVIHG
Sbjct: 151  RLLSVKGLPPWANTSCVRITDIIQGDILFAVLSNYMVDIDWLIPACPALAKVPQVLVIHG 210

Query: 771  EGDGTLEYMKRKKPANWLLHKPPLPISYGTHHSKAMLLVYPQGVRVIIHTANLIYVDWNN 950
            EGDGTL+ MKRKKPANW+LHKPPLPIS+GTHHSKA+ LVYP+G+R+++HTANLIYVDWNN
Sbjct: 211  EGDGTLDNMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNN 270

Query: 951  KSQGLWMQDFPWKNSNTSNKGCGFESDLVDYLSALKLPEFSASLPVLGNCSINASFFKRF 1130
            KSQGLWMQDFPWK+ N+S++GC FE DLVDYLSALK PEF AS P  GN +IN  FF++F
Sbjct: 271  KSQGLWMQDFPWKDQNSSSRGCAFEDDLVDYLSALKWPEFPASFPGHGNFNINPYFFRKF 330

Query: 1131 DYSSATVRLIASVPGYHSGSSLKKWGHMKLRTVLQESIFDQQFRKAPLVYQFSSLGSLDE 1310
            DYS A VRLIASVPGYH+G  LKKWGHMKLR+VLQE IFD++F+++PLVYQFSSLGSL+E
Sbjct: 331  DYSKAAVRLIASVPGYHTGRYLKKWGHMKLRSVLQECIFDKEFQRSPLVYQFSSLGSLNE 390

Query: 1311 KWMAELASSMSSGVSEDKVPLGVGEPLIVWPSVEDVRCSLEGYAAGNAIPSPEKNVEKEF 1490
            KWMAE A+S+SSG + DK PLG+GEPLIVWP+VEDVRCSLEGYAAG+A+PSP KNVEK F
Sbjct: 391  KWMAEFAASLSSGFTPDKTPLGLGEPLIVWPTVEDVRCSLEGYAAGSAVPSPLKNVEKGF 450

Query: 1491 LKKYWAKWKA 1520
            L KYWAKW +
Sbjct: 451  LTKYWAKWNS 460


>ref|XP_002873711.1| hypothetical protein ARALYDRAFT_488358 [Arabidopsis lyrata subsp.
            lyrata] gi|297319548|gb|EFH49970.1| hypothetical protein
            ARALYDRAFT_488358 [Arabidopsis lyrata subsp. lyrata]
          Length = 612

 Score =  617 bits (1590), Expect = e-174
 Identities = 303/493 (61%), Positives = 374/493 (75%), Gaps = 3/493 (0%)
 Frame = +3

Query: 51   QIGFLIPLNDKLEENNLNPKIPILNGSNSVGRDSIPVADKRLSRKHICIIASPNASAHLH 230
            Q+ +LIPL   L+E++ +P+I +  G N +GR ++ + DKRLSRKHI I+AS + SA L 
Sbjct: 5    QVAYLIPLKADLKEDDSSPRITLSEGPNFIGRGNVSIVDKRLSRKHITIMASTSGSASLS 64

Query: 231  VEGSNPVVVRSNN--QRKKLLSRESHMITDGDVIELIPGHHFFRFVAERNNLALISQKRD 404
            VEG+NPVV+RS+   +RKK+  RE   +++ D+IELIPGHHFF+ V     L  + +K  
Sbjct: 65   VEGTNPVVIRSSGGGERKKVKPREEVSVSNDDLIELIPGHHFFKLV-----LLPVEKK-- 117

Query: 405  NDQGNRVGEEDESVSRKRKKQVLQDEVFAKNLQAELNNNIPMRSTEAIRYFCPAIDKLSS 584
                   G  + +  + RK +   D+V                  EAIR FCP  +KL S
Sbjct: 118  -------GSHERATKKARKAE---DDV------------------EAIRRFCPPNEKLPS 149

Query: 585  TFRLMKVKGLPPWANTNAVSIGDVIHGNVLVAILSNYMVDIDWLTSACTTLNEVPHVLVI 764
            TFRL+ V GLP WANT+ VSI DVI G+++ AILSNYMVD+DWL SAC  L  +P V+VI
Sbjct: 150  TFRLLSVNGLPDWANTSCVSINDVIEGDIVAAILSNYMVDVDWLMSACPKLANIPQVMVI 209

Query: 765  HGEGDGTLEYMKRKKPANWLLHKPPLPISYGTHHSKAMLLVYPQGVRVIIHTANLIYVDW 944
            HGEGDG  EY++RKKP NW+LHKP LPIS+GTHHSKA+ LVYP+GVRV++HTANLI+VDW
Sbjct: 210  HGEGDGRQEYIQRKKPVNWILHKPRLPISFGTHHSKAIFLVYPRGVRVVVHTANLIHVDW 269

Query: 945  NNKSQGLWMQDFPWKNSNTSN-KGCGFESDLVDYLSALKLPEFSASLPVLGNCSINASFF 1121
            NNKSQGLWMQDFPWK+ +    KGCGFE DL+DYL+ LK PEFSA+LP  GN  INA+FF
Sbjct: 270  NNKSQGLWMQDFPWKDDDKDPPKGCGFEGDLIDYLTVLKWPEFSANLPGRGNVKINAAFF 329

Query: 1122 KRFDYSSATVRLIASVPGYHSGSSLKKWGHMKLRTVLQESIFDQQFRKAPLVYQFSSLGS 1301
            K+FDYS A VRLIASVPGYH+G +LKKWGHMKLRT+LQE IFD++F ++PLVYQFSSLGS
Sbjct: 330  KKFDYSDAKVRLIASVPGYHTGLNLKKWGHMKLRTILQECIFDREFCRSPLVYQFSSLGS 389

Query: 1302 LDEKWMAELASSMSSGVSEDKVPLGVGEPLIVWPSVEDVRCSLEGYAAGNAIPSPEKNVE 1481
            LDEKW+AE  +S+SSG+SEDK PLG G+PLI+WP+VEDVRCSLEGYAAGNAIPSP KNVE
Sbjct: 390  LDEKWLAEFGNSLSSGISEDKTPLGPGDPLIIWPTVEDVRCSLEGYAAGNAIPSPLKNVE 449

Query: 1482 KEFLKKYWAKWKA 1520
            K FLKKYWA+W A
Sbjct: 450  KPFLKKYWARWTA 462


>dbj|BAK06716.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  591 bits (1523), Expect = e-166
 Identities = 289/519 (55%), Positives = 385/519 (74%), Gaps = 22/519 (4%)
 Frame = +3

Query: 30   LMAASVPQIGFLIP-LNDKLEENNLN----PKIPILNGSNSVGRDSIPVADKRLSRKHIC 194
            + ++S  ++G L+P +  K    N +    P IPI  GSN VGR ++   DKR+SRKH+ 
Sbjct: 1    MSSSSRVRVGTLVPFVEGKSGSPNASSLPMPSIPIFEGSNVVGRSNLVAVDKRVSRKHLS 60

Query: 195  IIASPNASAHLHVEGSNPVVVRSNNQRKKLLSRESHMITDGDVIELIPGHHFFRFV--AE 368
            + A P+ S  + VEG+NP+VVRS  QR+K+ +++   I   DV+ELIPG +F ++V  ++
Sbjct: 61   LRAVPDGSVEVVVEGTNPIVVRSEGQRRKVCAQQRAKIMPDDVLELIPGEYFMKYVNMSD 120

Query: 369  RNNLALISQKRDNDQGNRVGEEDESVSRKRKKQVLQDEVFAKNLQ---AELNNNIPM--- 530
               ++      D  +G R  EED SV+ KR +QV++DE  A+ LQ   AE + ++     
Sbjct: 121  ERKISASVDSHDLKKGKRHSEED-SVAAKRNRQVMEDEALARTLQESFAEESASVTEVLS 179

Query: 531  ---------RSTEAIRYFCPAIDKLSSTFRLMKVKGLPPWANTNAVSIGDVIHGNVLVAI 683
                     R+ E      P  D L  +FRLM+V+GLP W NT+ V+I DVI G VL+A+
Sbjct: 180  SLDSAGSSERNKERTHSVGPLKDVLPLSFRLMRVQGLPSWTNTSTVTIQDVIQGEVLLAV 239

Query: 684  LSNYMVDIDWLTSACTTLNEVPHVLVIHGEGDGTLEYMKRKKPANWLLHKPPLPISYGTH 863
            LSNYMVD+DWL +AC +L +VPHVLV+HGE   +LE +K+ KP NW+LHKPPLPIS+GTH
Sbjct: 240  LSNYMVDMDWLLTACPSLRKVPHVLVLHGEDGASLERLKKTKPTNWILHKPPLPISFGTH 299

Query: 864  HSKAMLLVYPQGVRVIIHTANLIYVDWNNKSQGLWMQDFPWKNSNTSNKGCGFESDLVDY 1043
            HSKAMLLVYPQG+RV++HTANLI+VDWNNKSQGLW QDFPWK +N  +   GFE+DLVDY
Sbjct: 300  HSKAMLLVYPQGIRVVVHTANLIHVDWNNKSQGLWAQDFPWKEANDMSTNIGFENDLVDY 359

Query: 1044 LSALKLPEFSASLPVLGNCSINASFFKRFDYSSATVRLIASVPGYHSGSSLKKWGHMKLR 1223
            L ALK PEF  +LPV+G+ +INA+FF++FDYSS+TVRLI SVPGYH G ++KKWGHMKLR
Sbjct: 360  LRALKWPEFRVNLPVVGDVNINAAFFRKFDYSSSTVRLIGSVPGYHVGPNMKKWGHMKLR 419

Query: 1224 TVLQESIFDQQFRKAPLVYQFSSLGSLDEKWMAELASSMSSGVSEDKVPLGVGEPLIVWP 1403
            +VL+E +F++QF K+PL+YQFSSLGSLDEKWM+E A S+S+G ++D   LG+G+PLIVWP
Sbjct: 420  SVLEECVFEKQFCKSPLIYQFSSLGSLDEKWMSEFACSLSAGKADDGSQLGIGKPLIVWP 479

Query: 1404 SVEDVRCSLEGYAAGNAIPSPEKNVEKEFLKKYWAKWKA 1520
            +VEDVRCS+EGYAAG+ IPSP+KNVEK+FL+KYW++WKA
Sbjct: 480  TVEDVRCSIEGYAAGSCIPSPQKNVEKDFLRKYWSRWKA 518


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