BLASTX nr result

ID: Bupleurum21_contig00027974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027974
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298147.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002266116.1| PREDICTED: transcription factor GAMYB-like [...    76   2e-12
emb|CAN63791.1| hypothetical protein VITISV_037981 [Vitis vinifera]    76   2e-12
emb|CBI24294.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002313492.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11

>ref|XP_002298147.1| predicted protein [Populus trichocarpa] gi|222845405|gb|EEE82952.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 9/114 (7%)
 Frame = -2

Query: 319 LGSTAGTGYMLSTMHPGKRLREPESLLPGLNGVVSDVLPIFNEYQDDGSRKVAKVY-RGS 143
           +GS+ G G +  T+HP KR RE +++  GL+G VS  +P F+++ D    K+   +   S
Sbjct: 257 VGSSYGQGLVFPTIHPAKRFRESQTIFTGLDGSVSGGIPEFDQFTDYHRGKITGNFGLSS 316

Query: 142 FYD---FNFSSSPC-LLPGSHALING----YSSSDPISWATKLELPSIQNSDTQ 5
            Y     N+  S C +LPGSHA++NG     SSS+PI  ATKLELPS+Q S+TQ
Sbjct: 317 PYGCDLSNYDQSSCGVLPGSHAILNGNSSSSSSSEPIYRATKLELPSLQYSETQ 370


>ref|XP_002266116.1| PREDICTED: transcription factor GAMYB-like [Vitis vinifera]
          Length = 524

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 15/121 (12%)
 Frame = -2

Query: 319 LGSTAGTGYMLSTMHPGKRLREPESLLPGLNGVVSDVLPIFNEYQDDGSRKVAKVYRGSF 140
           LGS+ G  +M   MHP KR RE E+   GLN   S+  P  + Y D        +Y  + 
Sbjct: 212 LGSSDGQNFMFPAMHPPKRFRESETFFSGLNDDFSNAFPALDLYDDTCDNNPYYLYDDTC 271

Query: 139 ------YDFNFSSSPCL---------LPGSHALINGYSSSDPISWATKLELPSIQNSDTQ 5
                 ++++ S  P L         LPGSHAL NG  SS+PIS A K+ELPS+Q S+ Q
Sbjct: 272 EKNPQPFEWSSSYDPDLSTNLTSLGGLPGSHALSNGNFSSEPISGAMKVELPSLQYSEAQ 331

Query: 4   I 2
           +
Sbjct: 332 V 332


>emb|CAN63791.1| hypothetical protein VITISV_037981 [Vitis vinifera]
          Length = 460

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 15/121 (12%)
 Frame = -2

Query: 319 LGSTAGTGYMLSTMHPGKRLREPESLLPGLNGVVSDVLPIFNEYQDDGSRKVAKVYRGSF 140
           LGS+ G  +M   MHP KR RE E+   GLN   S+  P  + Y D        +Y  + 
Sbjct: 212 LGSSDGQNFMFPAMHPPKRFRESETFFSGLNDDFSNAFPALDLYDDTCDNNPYYLYDDTC 271

Query: 139 ------YDFNFSSSPCL---------LPGSHALINGYSSSDPISWATKLELPSIQNSDTQ 5
                 ++++ S  P L         LPGSHAL NG  SS+PIS A K+ELPS+Q S+ Q
Sbjct: 272 EKNPQPFEWSSSYDPDLSTNLTSLGGLPGSHALSNGNFSSEPISGAMKVELPSLQYSEAQ 331

Query: 4   I 2
           +
Sbjct: 332 V 332


>emb|CBI24294.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/106 (41%), Positives = 54/106 (50%)
 Frame = -2

Query: 319 LGSTAGTGYMLSTMHPGKRLREPESLLPGLNGVVSDVLPIFNEYQDDGSRKVAKVYRGSF 140
           LGS+ G  +M   MHP KR RE E+   GLN   S+  P  + Y D              
Sbjct: 212 LGSSDGQNFMFPAMHPPKRFRESETFFSGLNDDFSNAFPALDLYDDT------------- 258

Query: 139 YDFNFSSSPCLLPGSHALINGYSSSDPISWATKLELPSIQNSDTQI 2
                    C LPGSHAL NG  SS+PIS A K+ELPS+Q S+ Q+
Sbjct: 259 ---------CGLPGSHALSNGNFSSEPISGAMKVELPSLQYSEAQV 295


>ref|XP_002313492.1| predicted protein [Populus trichocarpa] gi|222849900|gb|EEE87447.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 8/113 (7%)
 Frame = -2

Query: 319 LGSTAGTGYMLSTMHPGKRLREPESLLPGLNGVVSDVLPIFNEYQDDGSRKVAKVYRG-- 146
           +GS+ G   +  T+HP KRLRE +++  GL+G V   +P+F++  D    K+ + + G  
Sbjct: 222 VGSSYGNALVFPTIHPAKRLRESQTIFTGLDGCVGRGMPVFDQLTDYPCGKIIE-HSGLS 280

Query: 145 SFYDFNFSS----SPCLLPGSHALINGYSSSD--PISWATKLELPSIQNSDTQ 5
           S YD + S+    S  +LPGSHA++N  SSS   PI    KLELPS+Q S++Q
Sbjct: 281 SPYDPDLSTYDQPSWDVLPGSHAILNDNSSSSNVPICGTMKLELPSLQYSESQ 333


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