BLASTX nr result

ID: Bupleurum21_contig00027970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027970
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142066.1| PREDICTED: expansin-A4-like [Cucumis sativus]     231   6e-59
gb|ABI94060.1| ripening-related expansin [Cucumis melo]               231   6e-59
dbj|BAC67193.1| expansin [Pyrus communis]                             228   5e-58
emb|CAH18933.1| expansin [Pyrus communis]                             228   5e-58
ref|NP_180461.1| expansin A6 [Arabidopsis thaliana] gi|44889064|...   227   7e-58

>ref|XP_004142066.1| PREDICTED: expansin-A4-like [Cucumis sativus]
          Length = 259

 Score =  231 bits (588), Expect = 6e-59
 Identities = 101/112 (90%), Positives = 108/112 (96%)
 Frame = +2

Query: 2   VNTAALSTALFNNGQSCGACFEIKCASDPQWCHPGSPSIFITATNFCPPNFAQPSDNGGW 181
           VNTAALSTALFNNG SCGACFEIKCA+DP+WCHPGSPSIFITATNFCPPNFA P+DNGGW
Sbjct: 66  VNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPNDNGGW 125

Query: 182 CNPPRTHFDLAMPMFLKLAQYKAGIVPVNYRRVPCRKSGGIRFTINGFNYFN 337
           CNPPRTHFDLAMPMFLK+A+Y+AGIVPV+YRRVPCRK GGIRFTINGF YFN
Sbjct: 126 CNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFN 177


>gb|ABI94060.1| ripening-related expansin [Cucumis melo]
          Length = 259

 Score =  231 bits (588), Expect = 6e-59
 Identities = 101/112 (90%), Positives = 108/112 (96%)
 Frame = +2

Query: 2   VNTAALSTALFNNGQSCGACFEIKCASDPQWCHPGSPSIFITATNFCPPNFAQPSDNGGW 181
           VNTAALSTALFNNG SCGACFEIKCA+DP+WCHPGSPSIFITATNFCPPNFA P+DNGGW
Sbjct: 66  VNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALPNDNGGW 125

Query: 182 CNPPRTHFDLAMPMFLKLAQYKAGIVPVNYRRVPCRKSGGIRFTINGFNYFN 337
           CNPPRTHFDLAMPMFLK+A+Y+AGIVPV+YRRVPCRK GGIRFTINGF YFN
Sbjct: 126 CNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFN 177


>dbj|BAC67193.1| expansin [Pyrus communis]
          Length = 258

 Score =  228 bits (580), Expect = 5e-58
 Identities = 98/112 (87%), Positives = 106/112 (94%)
 Frame = +2

Query: 2   VNTAALSTALFNNGQSCGACFEIKCASDPQWCHPGSPSIFITATNFCPPNFAQPSDNGGW 181
           VNTAALSTALFNNG SCGACFEIKC  DP+WCHPG+PSI +TATNFCPPNFAQPSD+GGW
Sbjct: 65  VNTAALSTALFNNGLSCGACFEIKCGDDPRWCHPGNPSILVTATNFCPPNFAQPSDDGGW 124

Query: 182 CNPPRTHFDLAMPMFLKLAQYKAGIVPVNYRRVPCRKSGGIRFTINGFNYFN 337
           CNPPRTHFDLAMPMFLK+A+YKAGIVPV+YRRVPCRK GG+RFTINGF YFN
Sbjct: 125 CNPPRTHFDLAMPMFLKIAEYKAGIVPVSYRRVPCRKQGGVRFTINGFRYFN 176


>emb|CAH18933.1| expansin [Pyrus communis]
          Length = 258

 Score =  228 bits (580), Expect = 5e-58
 Identities = 98/112 (87%), Positives = 106/112 (94%)
 Frame = +2

Query: 2   VNTAALSTALFNNGQSCGACFEIKCASDPQWCHPGSPSIFITATNFCPPNFAQPSDNGGW 181
           VNTAALSTALFNNG SCGACFEIKC  DP+WCHPG+PSI +TATNFCPPNFAQPSD+GGW
Sbjct: 65  VNTAALSTALFNNGLSCGACFEIKCGDDPRWCHPGNPSILVTATNFCPPNFAQPSDDGGW 124

Query: 182 CNPPRTHFDLAMPMFLKLAQYKAGIVPVNYRRVPCRKSGGIRFTINGFNYFN 337
           CNPPRTHFDLAMPMFLK+A+YKAGIVPV+YRRVPCRK GG+RFTINGF YFN
Sbjct: 125 CNPPRTHFDLAMPMFLKIAEYKAGIVPVSYRRVPCRKQGGVRFTINGFRYFN 176


>ref|NP_180461.1| expansin A6 [Arabidopsis thaliana]
           gi|44889064|sp|Q38865.2|EXPA6_ARATH RecName:
           Full=Expansin-A6; Short=AtEXPA6; AltName:
           Full=Alpha-expansin-6; Short=At-EXP6; Short=AtEx6;
           AltName: Full=Ath-ExpAlpha-1.8; Flags: Precursor
           gi|3461837|gb|AAC33223.1| expansin AtEx6 [Arabidopsis
           thaliana] gi|16648832|gb|AAL25606.1| At2g28950/F8N16.24
           [Arabidopsis thaliana] gi|17865812|gb|AAB38072.2|
           expansin At-EXPA6 [Arabidopsis thaliana]
           gi|18252949|gb|AAL62401.1| expansin AtEx6 [Arabidopsis
           thaliana] gi|20197436|gb|AAM15074.1| expansin AtEx6
           [Arabidopsis thaliana] gi|28059544|gb|AAO30068.1|
           expansin AtEx6 [Arabidopsis thaliana]
           gi|330253100|gb|AEC08194.1| expansin A6 [Arabidopsis
           thaliana]
          Length = 257

 Score =  227 bits (579), Expect = 7e-58
 Identities = 100/112 (89%), Positives = 107/112 (95%)
 Frame = +2

Query: 2   VNTAALSTALFNNGQSCGACFEIKCASDPQWCHPGSPSIFITATNFCPPNFAQPSDNGGW 181
           VNTAALSTALFNNG SCGACFE+KCASDP+WCH GSPSIFITATNFCPPNFAQPSDNGGW
Sbjct: 64  VNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGW 123

Query: 182 CNPPRTHFDLAMPMFLKLAQYKAGIVPVNYRRVPCRKSGGIRFTINGFNYFN 337
           CNPPR HFDLAMPMFLK+A+Y+AGIVPV++RRVPCRK GGIRFTINGF YFN
Sbjct: 124 CNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFN 175


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