BLASTX nr result

ID: Bupleurum21_contig00027958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027958
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]      63   3e-08
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...    62   5e-08
emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]    62   5e-08

>ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|222872676|gb|EEF09807.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
 Frame = -3

Query: 294 YECNQCKYILHRYCAQFPIEIQHPVLGNY--KGCPTGVFPYDIFACEGCSVYGNGFEMIF 121
           Y C QC Y LH  C+Q P +I HP   N+      T ++P D+F C+ C   GNGF    
Sbjct: 49  YACTQCNYFLHVSCSQMPQQITHPYHQNHVLSLLSTPMYPGDLFNCDACGKQGNGFS--- 105

Query: 120 SKPLPFGCHLVDIW----CACLPQEIKHRAHHHSLKLQFYNP 7
                + C   +I+    CA +P  + H++HHH L L  + P
Sbjct: 106 -----YHCGTCNIYIHTTCAAMPLVLTHQSHHHQLNLTPFAP 142


>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
 Frame = -3

Query: 294 YECNQCKYILHRYCAQFPIEIQHPV--LGNYKGCPTGVFPYDIFACEGCSVYGNGFEMIF 121
           Y C  C + LH  C Q P  I HP   +       T V+P   F C+GC + GNGF    
Sbjct: 44  YSCKPCNFTLHISCTQMPTLITHPCHPIHPLTLFSTPVYPGGSFNCDGCGLQGNGFN-YH 102

Query: 120 SKPLPFGCHLVDIWCACLPQEIKHRAHHHSLKLQFYNP 7
                F  H++   CA  P  + H++H H L L FY P
Sbjct: 103 CTTCDFDVHMM---CATNPLSLAHQSHPHQLNLAFYPP 137


>dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]
          Length = 212

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
 Frame = -3

Query: 294 YECNQCKYILHRYCAQFPIEIQHPV--LGNYKGCPTGVFPYDIFACEGCSVYGNGFEMIF 121
           Y C  C + LH  C+Q P +I HP     ++   P  ++P   F C+ C   G+GF    
Sbjct: 52  YTCKSCNFFLHTECSQMPQQITHPFDKEHHFTLLPKPIYPDGKFNCDACGENGDGFS-YH 110

Query: 120 SKPLPFGCHLVDIWCACLPQEIKHRAHHHSLKLQFYNP 7
            K      H++   CA  PQ + H +HHH L L+F  P
Sbjct: 111 CKTCGTDLHIL---CAVFPQCVTHWSHHHQLDLKFSPP 145


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
 Frame = -3

Query: 294 YECNQCKYILHRYCAQFPIEIQHPVLGNY--KGCPTGVFPYDIFACEGCSVYGNGFEMIF 121
           Y+C +C Y LH  C+Q P +I H     +     P   +P  +F C+ C   GNGF    
Sbjct: 49  YDCKRCNYFLHISCSQMPQQITHSFHKAHALSLLPNPAYPEGLFNCDACGKQGNGFSYHC 108

Query: 120 SKPLPFGCHL-VDIWCACLPQEIKHRAHHHSLKLQFYNP 7
                  C++ + I CA  P  + H++HHH L L F  P
Sbjct: 109 GV-----CNIDLHILCASKPLFLNHQSHHHRLALSFSPP 142


>emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]
          Length = 366

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
 Frame = -3

Query: 294 YECNQCKYILHRYCAQFPIEIQHPVLGNY--KGCPTGVFPYDIFACEGCSVYGNGFEMIF 121
           Y+C +C Y LH  C+Q P +I H     +     P   +P  +F C+ C   GNGF    
Sbjct: 55  YDCKRCNYFLHISCSQMPQQITHSFHKAHALSLLPNPAYPEGLFNCDACGKQGNGFSYHC 114

Query: 120 SKPLPFGCHL-VDIWCACLPQEIKHRAHHHSLKLQFYNP 7
                  C++ + I CA  P  + H++HHH L L F  P
Sbjct: 115 GV-----CNIDLHILCASKPLFLNHQSHHHRLALSFSPP 148


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