BLASTX nr result

ID: Bupleurum21_contig00027937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027937
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509901.1| atpob1, putative [Ricinus communis] gi|22354...   156   1e-36
ref|XP_002276076.2| PREDICTED: BTB/POZ domain-containing protein...   152   3e-35
emb|CBI34431.3| unnamed protein product [Vitis vinifera]              152   3e-35
emb|CAN63457.1| hypothetical protein VITISV_008241 [Vitis vinifera]   152   3e-35
ref|XP_002303620.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33

>ref|XP_002509901.1| atpob1, putative [Ricinus communis] gi|223549800|gb|EEF51288.1|
           atpob1, putative [Ricinus communis]
          Length = 734

 Score =  156 bits (395), Expect = 1e-36
 Identities = 70/122 (57%), Positives = 96/122 (78%)
 Frame = -2

Query: 368 TPSELLDILKIADKFEVASCMQYCSEKLREFPLTVDSALSYVDLQSSVSHTSEIQPLIDS 189
           TP+ LLD+L  ADKFEVASCM+YCS  LR  P+T DSAL Y+DL S+V     +QPL D+
Sbjct: 219 TPTALLDVLMAADKFEVASCMRYCSRMLRNLPMTCDSALLYLDLPSTVLMADAVQPLTDA 278

Query: 188 AKKYIAVQFREIKRYENKVLNLPLTGLEAVLSSDAIEVESEDEIYDLVLKWAELHYPDVE 9
           AK+Y+A ++++I +++ +VLNLPL G+EA+LSSD ++V SED +YD VLKWA +HYP +E
Sbjct: 279 AKQYLAARYKDINKFQEEVLNLPLAGIEAILSSDDLQVASEDAVYDFVLKWARIHYPKLE 338

Query: 8   KR 3
           +R
Sbjct: 339 ER 340


>ref|XP_002276076.2| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis
           vinifera]
          Length = 722

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/122 (56%), Positives = 95/122 (77%)
 Frame = -2

Query: 368 TPSELLDILKIADKFEVASCMQYCSEKLREFPLTVDSALSYVDLQSSVSHTSEIQPLIDS 189
           TP+ LLD+L  ADKFEVASCM+YCS  LR  P+T +SAL Y+DL SSV     +QPL D+
Sbjct: 214 TPTALLDVLMAADKFEVASCMRYCSRMLRNLPMTCESALLYLDLPSSVLMAEAVQPLTDA 273

Query: 188 AKKYIAVQFREIKRYENKVLNLPLTGLEAVLSSDAIEVESEDEIYDLVLKWAELHYPDVE 9
           AK+++A +++++ +++ +VLNLPL G+EAVLSSD ++V SED +YD VLKWA +HYP +E
Sbjct: 274 AKQFLAGRYKDVTKFQEEVLNLPLAGIEAVLSSDDLQVASEDAVYDFVLKWARIHYPKLE 333

Query: 8   KR 3
            R
Sbjct: 334 DR 335


>emb|CBI34431.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/122 (56%), Positives = 95/122 (77%)
 Frame = -2

Query: 368 TPSELLDILKIADKFEVASCMQYCSEKLREFPLTVDSALSYVDLQSSVSHTSEIQPLIDS 189
           TP+ LLD+L  ADKFEVASCM+YCS  LR  P+T +SAL Y+DL SSV     +QPL D+
Sbjct: 266 TPTALLDVLMAADKFEVASCMRYCSRMLRNLPMTCESALLYLDLPSSVLMAEAVQPLTDA 325

Query: 188 AKKYIAVQFREIKRYENKVLNLPLTGLEAVLSSDAIEVESEDEIYDLVLKWAELHYPDVE 9
           AK+++A +++++ +++ +VLNLPL G+EAVLSSD ++V SED +YD VLKWA +HYP +E
Sbjct: 326 AKQFLAGRYKDVTKFQEEVLNLPLAGIEAVLSSDDLQVASEDAVYDFVLKWARIHYPKLE 385

Query: 8   KR 3
            R
Sbjct: 386 DR 387


>emb|CAN63457.1| hypothetical protein VITISV_008241 [Vitis vinifera]
          Length = 526

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/122 (56%), Positives = 95/122 (77%)
 Frame = -2

Query: 368 TPSELLDILKIADKFEVASCMQYCSEKLREFPLTVDSALSYVDLQSSVSHTSEIQPLIDS 189
           TP+ LLD+L  ADKFEVASCM+YCS  LR  P+T +SAL Y+DL SSV     +QPL D+
Sbjct: 183 TPTALLDVLMAADKFEVASCMRYCSRMLRNLPMTCESALLYLDLPSSVLMAEAVQPLTDA 242

Query: 188 AKKYIAVQFREIKRYENKVLNLPLTGLEAVLSSDAIEVESEDEIYDLVLKWAELHYPDVE 9
           AK+++A +++++ +++ +VLNLPL G+EAVLSSD ++V SED +YD VLKWA +HYP +E
Sbjct: 243 AKQFLAGRYKDVTKFQEEVLNLPLAGIEAVLSSDDLQVASEDAVYDFVLKWARIHYPKLE 302

Query: 8   KR 3
            R
Sbjct: 303 DR 304


>ref|XP_002303620.1| predicted protein [Populus trichocarpa] gi|222841052|gb|EEE78599.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score =  146 bits (369), Expect = 1e-33
 Identities = 67/118 (56%), Positives = 92/118 (77%)
 Frame = -2

Query: 356 LLDILKIADKFEVASCMQYCSEKLREFPLTVDSALSYVDLQSSVSHTSEIQPLIDSAKKY 177
           LLD+L  ADKF+VASCM+YCS  LR  P+T +SAL Y+DL SS+     +QPL D+AK++
Sbjct: 222 LLDVLLAADKFKVASCMRYCSRLLRSIPMTCESALLYLDLPSSILMAEAVQPLTDAAKQF 281

Query: 176 IAVQFREIKRYENKVLNLPLTGLEAVLSSDAIEVESEDEIYDLVLKWAELHYPDVEKR 3
           +AV+++EI +++ +VL LPL G+EAVLSSD ++  SED +YDLVLKWA  HYP +E+R
Sbjct: 282 LAVKYKEISKFQEEVLKLPLAGIEAVLSSDDLQAASEDTLYDLVLKWARTHYPKLEER 339


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