BLASTX nr result

ID: Bupleurum21_contig00027936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027936
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282789.2| PREDICTED: uncharacterized protein LOC100259...   138   5e-31
ref|XP_003527787.1| PREDICTED: uncharacterized protein LOC100788...   134   6e-30
ref|XP_003523685.1| PREDICTED: uncharacterized protein LOC100780...   134   6e-30
ref|XP_003603358.1| CGS1 mRNA stability [Medicago truncatula] gi...   132   3e-29
ref|XP_004136360.1| PREDICTED: uncharacterized protein LOC101209...   129   2e-28

>ref|XP_002282789.2| PREDICTED: uncharacterized protein LOC100259525 [Vitis vinifera]
           gi|296082057|emb|CBI21062.3| unnamed protein product
           [Vitis vinifera]
          Length = 1683

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/91 (72%), Positives = 73/91 (80%)
 Frame = +3

Query: 3   HRDSWHRFSSKKKSHGWCDFTPSGSILDPKSGFLHNNDSILITADILVLNESVNFTRDNN 182
           HRDSWHRFSSKKKSHGWCDFTPS ++ D KSG+L NNDS+LITADIL+LNESVNFTRDNN
Sbjct: 154 HRDSWHRFSSKKKSHGWCDFTPSTTLFDSKSGYLFNNDSVLITADILILNESVNFTRDNN 213

Query: 183 ELQSNSTGPXXXXXXXXXXEFLSGKFTWKVH 275
           ELQS S+            + LSGKFTWKVH
Sbjct: 214 ELQSASS-MASMVVAGPVSDVLSGKFTWKVH 243


>ref|XP_003527787.1| PREDICTED: uncharacterized protein LOC100788511 [Glycine max]
          Length = 1679

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/95 (66%), Positives = 72/95 (75%), Gaps = 4/95 (4%)
 Frame = +3

Query: 3   HRDSWHRFSSKKKSHGWCDFTPSGSILDPKSGFLHNNDSILITADILVLNESVNFTRDNN 182
           HRDSWHRFSSKKKSHGWCDFTPS ++ DPK G+L N DS+LITADIL+LNESVNFTRDNN
Sbjct: 144 HRDSWHRFSSKKKSHGWCDFTPSNTVFDPKLGYLFNTDSVLITADILILNESVNFTRDNN 203

Query: 183 ELQSNSTGP----XXXXXXXXXXEFLSGKFTWKVH 275
           E+QS+S+                +  SGKFTWKVH
Sbjct: 204 EVQSSSSSSSNAMTSSVVAGPVSDVSSGKFTWKVH 238


>ref|XP_003523685.1| PREDICTED: uncharacterized protein LOC100780104 [Glycine max]
          Length = 1622

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/95 (66%), Positives = 72/95 (75%), Gaps = 4/95 (4%)
 Frame = +3

Query: 3   HRDSWHRFSSKKKSHGWCDFTPSGSILDPKSGFLHNNDSILITADILVLNESVNFTRDNN 182
           HRDSWHRFSSKKKSHGWCDFTPS ++ DPK G+L N DS+LITADIL+LNESVNFTRDNN
Sbjct: 144 HRDSWHRFSSKKKSHGWCDFTPSNTVFDPKLGYLFNTDSVLITADILILNESVNFTRDNN 203

Query: 183 ELQSNSTGP----XXXXXXXXXXEFLSGKFTWKVH 275
           E+QS+S+                +  SGKFTWKVH
Sbjct: 204 EVQSSSSSSSSAMTSSVVASPVSDVSSGKFTWKVH 238


>ref|XP_003603358.1| CGS1 mRNA stability [Medicago truncatula]
           gi|355492406|gb|AES73609.1| CGS1 mRNA stability
           [Medicago truncatula]
          Length = 1714

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/94 (65%), Positives = 72/94 (76%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   HRDSWHRFSSKKKSHGWCDFTPSGSILDPKSGFLHNNDSILITADILVLNESVNFTRDNN 182
           HRDSWHRFS+KK+SHGWCDFTP+ +I DPK G+L NNDS+LITADIL+LNESVNFTR+NN
Sbjct: 151 HRDSWHRFSTKKQSHGWCDFTPASTIFDPKLGYLFNNDSVLITADILILNESVNFTRENN 210

Query: 183 ELQSNSTGP---XXXXXXXXXXEFLSGKFTWKVH 275
           EL S+S                + LSGKFTWKVH
Sbjct: 211 ELLSSSLSSSTLSSSVVAGPVSDVLSGKFTWKVH 244


>ref|XP_004136360.1| PREDICTED: uncharacterized protein LOC101209841 [Cucumis sativus]
           gi|449516864|ref|XP_004165466.1| PREDICTED: LOW QUALITY
           PROTEIN: uncharacterized LOC101209841 [Cucumis sativus]
          Length = 1686

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/91 (68%), Positives = 70/91 (76%)
 Frame = +3

Query: 3   HRDSWHRFSSKKKSHGWCDFTPSGSILDPKSGFLHNNDSILITADILVLNESVNFTRDNN 182
           HRDSWHRFSSKKKSHGWCDFTPS ++ D K G+L +N+SILITADIL+LNESVNFTRDNN
Sbjct: 159 HRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFSNESILITADILILNESVNFTRDNN 218

Query: 183 ELQSNSTGPXXXXXXXXXXEFLSGKFTWKVH 275
           E  ++S             E LSGKFTWKVH
Sbjct: 219 E-PASSMMMTSSLVACPAPEVLSGKFTWKVH 248


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