BLASTX nr result

ID: Bupleurum21_contig00027922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027922
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280912.1| PREDICTED: uncharacterized protein LOC100252...   104   3e-25
ref|XP_004147482.1| PREDICTED: uncharacterized protein LOC101207...   107   2e-23
ref|XP_004167114.1| PREDICTED: uncharacterized LOC101207849 [Cuc...   107   2e-23
emb|CBI34990.3| unnamed protein product [Vitis vinifera]              104   2e-21
ref|NP_178539.2| Cation efflux family protein [Arabidopsis thali...    90   2e-18

>ref|XP_002280912.1| PREDICTED: uncharacterized protein LOC100252487 [Vitis vinifera]
          Length = 807

 Score =  104 bits (259), Expect(2) = 3e-25
 Identities = 46/64 (71%), Positives = 56/64 (87%)
 Frame = -2

Query: 193 PNSNCVRIWPMLLPFLAGFLGCYERVAMNWGNLRDLDRKQLRLVSLFFTTV*LFVPAVIS 14
           P  NCVR+ PMLLPFL+GFLGCYERV+MNWG +R L RK++RL+SLFFTTV LFVPAV+S
Sbjct: 249 PRENCVRVLPMLLPFLSGFLGCYERVSMNWGTIRQLGRKRVRLISLFFTTVILFVPAVVS 308

Query: 13  MFVF 2
           + +F
Sbjct: 309 ILMF 312



 Score = 35.8 bits (81), Expect(2) = 3e-25
 Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = -1

Query: 410 ARFVADGKNRNF---TDFGLSKXXXXXXXXXXXXXXXXSWDRVECFPFS 273
           ARFVA+G+NRNF      GL K                SW R+ECFP S
Sbjct: 188 ARFVAEGRNRNFGVRDRSGLPKVRGFFALFVGLFLLSMSWYRIECFPLS 236


>ref|XP_004147482.1| PREDICTED: uncharacterized protein LOC101207849 [Cucumis sativus]
          Length = 820

 Score =  107 bits (267), Expect(2) = 2e-23
 Identities = 46/64 (71%), Positives = 58/64 (90%)
 Frame = -2

Query: 193 PNSNCVRIWPMLLPFLAGFLGCYERVAMNWGNLRDLDRKQLRLVSLFFTTV*LFVPAVIS 14
           P  NC+RIWPMLLPFL+GFLGCYER++MNWG+++ L +K++RLVSLFFTT+ LFVPAVIS
Sbjct: 247 PRENCMRIWPMLLPFLSGFLGCYERISMNWGSVKQLGQKRVRLVSLFFTTIILFVPAVIS 306

Query: 13  MFVF 2
           M +F
Sbjct: 307 MLLF 310



 Score = 26.6 bits (57), Expect(2) = 2e-23
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -1

Query: 410 ARFVADGKNR----NFTDFGLSKXXXXXXXXXXXXXXXXSWDRVECFPFS 273
           ARF+A+ +NR    + T    S+                SWDR++CFPF+
Sbjct: 185 ARFLAERRNRMTMGDRTRSRSSEVRGFLSLFLGLFLLSISWDRIDCFPFA 234


>ref|XP_004167114.1| PREDICTED: uncharacterized LOC101207849 [Cucumis sativus]
          Length = 818

 Score =  107 bits (267), Expect(2) = 2e-23
 Identities = 46/64 (71%), Positives = 58/64 (90%)
 Frame = -2

Query: 193 PNSNCVRIWPMLLPFLAGFLGCYERVAMNWGNLRDLDRKQLRLVSLFFTTV*LFVPAVIS 14
           P  NC+RIWPMLLPFL+GFLGCYER++MNWG+++ L +K++RLVSLFFTT+ LFVPAVIS
Sbjct: 247 PRENCMRIWPMLLPFLSGFLGCYERISMNWGSVKQLGQKRVRLVSLFFTTIILFVPAVIS 306

Query: 13  MFVF 2
           M +F
Sbjct: 307 MLLF 310



 Score = 26.6 bits (57), Expect(2) = 2e-23
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -1

Query: 410 ARFVADGKNR----NFTDFGLSKXXXXXXXXXXXXXXXXSWDRVECFPFS 273
           ARF+A+ +NR    + T    S+                SWDR++CFPF+
Sbjct: 185 ARFLAERRNRMTMGDRTRSRSSEVRGFLSLFLGLFLLSISWDRIDCFPFA 234


>emb|CBI34990.3| unnamed protein product [Vitis vinifera]
          Length = 1092

 Score =  104 bits (259), Expect(2) = 2e-21
 Identities = 46/64 (71%), Positives = 56/64 (87%)
 Frame = -2

Query: 193 PNSNCVRIWPMLLPFLAGFLGCYERVAMNWGNLRDLDRKQLRLVSLFFTTV*LFVPAVIS 14
           P  NCVR+ PMLLPFL+GFLGCYERV+MNWG +R L RK++RL+SLFFTTV LFVPAV+S
Sbjct: 25  PRENCVRVLPMLLPFLSGFLGCYERVSMNWGTIRQLGRKRVRLISLFFTTVILFVPAVVS 84

Query: 13  MFVF 2
           + +F
Sbjct: 85  ILMF 88



 Score = 22.7 bits (47), Expect(2) = 2e-21
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 302 WDRVECFPFS 273
           W R+ECFP S
Sbjct: 3   WYRIECFPLS 12


>ref|NP_178539.2| Cation efflux family protein [Arabidopsis thaliana]
           gi|330250755|gb|AEC05849.1| Cation efflux family protein
           [Arabidopsis thaliana]
          Length = 798

 Score = 89.7 bits (221), Expect(2) = 2e-18
 Identities = 38/62 (61%), Positives = 51/62 (82%)
 Frame = -2

Query: 193 PNSNCVRIWPMLLPFLAGFLGCYERVAMNWGNLRDLDRKQLRLVSLFFTTV*LFVPAVIS 14
           P  NC+RIWP+LLPFL+GFLGCYE+V++NW  ++ LD+K++RL+SLF TTV LF  A+ S
Sbjct: 235 PKENCLRIWPLLLPFLSGFLGCYEKVSVNWNEIKQLDQKRVRLLSLFLTTVLLFPLAIWS 294

Query: 13  MF 8
            F
Sbjct: 295 FF 296



 Score = 27.7 bits (60), Expect(2) = 2e-18
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -1

Query: 302 WDRVECFPFS 273
           WDRV+CFPFS
Sbjct: 214 WDRVDCFPFS 223


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