BLASTX nr result

ID: Bupleurum21_contig00027883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027883
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21497.3| unnamed protein product [Vitis vinifera]              115   8e-24
ref|XP_002280314.1| PREDICTED: protein CPR-5-like [Vitis vinifera]    115   8e-24
ref|XP_002306346.1| predicted protein [Populus trichocarpa] gi|2...   106   7e-21
ref|XP_002528666.1| Protein CPR-5, putative [Ricinus communis] g...   100   6e-19
gb|AFK34699.1| unknown [Medicago truncatula]                           96   7e-18

>emb|CBI21497.3| unnamed protein product [Vitis vinifera]
          Length = 468

 Score =  115 bits (289), Expect = 8e-24
 Identities = 76/181 (41%), Positives = 97/181 (53%), Gaps = 5/181 (2%)
 Frame = +3

Query: 6   VSNRYRNPRRAY-VRPNQNDVVGAIALPTGMAIAAVLSQVLEQKHSTEDMMSVDHLSKIF 182
           V N+ RNPR    +         AIALP GM+IAA++SQ+LE+K    + MSVDHLS I 
Sbjct: 91  VGNKRRNPRILMGLNRRSESEAEAIALPLGMSIAAIVSQILERKDEAGERMSVDHLSMIC 150

Query: 183 TSAVGESLANVFGDKYDCFANNFEKSFHSTLMTLRLVNKSSHNDKAEYFQDSRTEKYCAG 362
           T AV ESLANVFGDK+DCF  NFEKSF STL TLRL+N+S  N    +      +   + 
Sbjct: 151 TMAVRESLANVFGDKFDCFVRNFEKSFGSTLRTLRLINESPLNKVGGHLSHFNVQNSGSD 210

Query: 363 LISGTSLNR----ERSSICYPHDEAYSRAETVLNTNIQKEPSTLEAKEVNMQPNQINHAL 530
           L     LNR      SSI   H          L        +TLE ++ ++Q +  N  L
Sbjct: 211 LNLPVPLNRGDTISSSSISDHHSSMGLHPVATLEC-----LNTLEERQESIQTDSANREL 265

Query: 531 S 533
           +
Sbjct: 266 T 266


>ref|XP_002280314.1| PREDICTED: protein CPR-5-like [Vitis vinifera]
          Length = 587

 Score =  115 bits (289), Expect = 8e-24
 Identities = 76/181 (41%), Positives = 97/181 (53%), Gaps = 5/181 (2%)
 Frame = +3

Query: 6   VSNRYRNPRRAY-VRPNQNDVVGAIALPTGMAIAAVLSQVLEQKHSTEDMMSVDHLSKIF 182
           V N+ RNPR    +         AIALP GM+IAA++SQ+LE+K    + MSVDHLS I 
Sbjct: 91  VGNKRRNPRILMGLNRRSESEAEAIALPLGMSIAAIVSQILERKDEAGERMSVDHLSMIC 150

Query: 183 TSAVGESLANVFGDKYDCFANNFEKSFHSTLMTLRLVNKSSHNDKAEYFQDSRTEKYCAG 362
           T AV ESLANVFGDK+DCF  NFEKSF STL TLRL+N+S  N    +      +   + 
Sbjct: 151 TMAVRESLANVFGDKFDCFVRNFEKSFGSTLRTLRLINESPLNKVGGHLSHFNVQNSGSD 210

Query: 363 LISGTSLNR----ERSSICYPHDEAYSRAETVLNTNIQKEPSTLEAKEVNMQPNQINHAL 530
           L     LNR      SSI   H          L        +TLE ++ ++Q +  N  L
Sbjct: 211 LNLPVPLNRGDTISSSSISDHHSSMGLHPVATLEC-----LNTLEERQESIQTDSANREL 265

Query: 531 S 533
           +
Sbjct: 266 T 266


>ref|XP_002306346.1| predicted protein [Populus trichocarpa] gi|222855795|gb|EEE93342.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  106 bits (264), Expect = 7e-21
 Identities = 59/107 (55%), Positives = 79/107 (73%), Gaps = 5/107 (4%)
 Frame = +3

Query: 6   VSNRYRNPRRAYVRPNQ-----NDVVGAIALPTGMAIAAVLSQVLEQKHSTEDMMSVDHL 170
           VS++ R+P+  +    +     +D V AIALP GM+ AAV++QVLE+K +  + MSVDHL
Sbjct: 71  VSHKRRSPKVVFAPVRRRGGIGDDGVEAIALPLGMSFAAVVAQVLERKDAAGERMSVDHL 130

Query: 171 SKIFTSAVGESLANVFGDKYDCFANNFEKSFHSTLMTLRLVNKSSHN 311
           S I +SAV ESLA+VFG+K+D FA NF+KSF STL TLRL+N+SS N
Sbjct: 131 SMICSSAVRESLASVFGNKFDFFARNFQKSFGSTLSTLRLINESSIN 177


>ref|XP_002528666.1| Protein CPR-5, putative [Ricinus communis]
           gi|223531889|gb|EEF33705.1| Protein CPR-5, putative
           [Ricinus communis]
          Length = 547

 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 50/80 (62%), Positives = 63/80 (78%)
 Frame = +3

Query: 72  AIALPTGMAIAAVLSQVLEQKHSTEDMMSVDHLSKIFTSAVGESLANVFGDKYDCFANNF 251
           A+ALP GM+ AA++++ +E K +  D MSVD L+KI  SAV ESLANVFGDK+D FA NF
Sbjct: 85  AVALPLGMSFAAIIAKFMETKDAAGDKMSVDRLTKICASAVRESLANVFGDKFDFFARNF 144

Query: 252 EKSFHSTLMTLRLVNKSSHN 311
           EKSF STL TLRL+N++S N
Sbjct: 145 EKSFGSTLSTLRLINEASLN 164


>gb|AFK34699.1| unknown [Medicago truncatula]
          Length = 371

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 7/196 (3%)
 Frame = +3

Query: 6   VSNRYRNPRRAYVRPNQNDVVGAIALPTGMAIAAVLSQVLEQKHSTEDMMSVDHLSKIFT 185
           ++ + RNPR + VR  + + V AI  P GM++AAV++QVL ++ +  + MS DHLS + T
Sbjct: 51  IACKRRNPRVS-VRRTRGNNVAAIGFPLGMSVAAVMAQVLYRRDAAAEGMSPDHLSSMCT 109

Query: 186 SAVGESLANVFGDKYDCFANNFEKSFHSTLMTLRLVNKSSHNDKAEYFQDSRTEKYCAGL 365
           SA+ ESL++VFGDK D    NFE+SF STL TLRL+ +S  +++     + R E   +  
Sbjct: 110 SAIQESLSSVFGDKLDGLTRNFEQSFDSTLSTLRLIYESPASNEGNKLNNMRLEIPSSKF 169

Query: 366 ISGTSLNRERSSICYPHDEAYSRAETVLNTNIQKE-------PSTLEAKEVNMQPNQINH 524
           I G            P   +++ AE V  +N ++E        S      ++ Q NQ+  
Sbjct: 170 IRGDCSRDIAIEEDQPGLLSHAHAEIVDQSNRREEVGDNFHMESVTRDVALHGQSNQMVC 229

Query: 525 ALSPRDGNVNSDPASS 572
              P  G + ++P  S
Sbjct: 230 FAPPSSGALVNNPVIS 245


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