BLASTX nr result

ID: Bupleurum21_contig00027876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027876
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523570.1| conserved hypothetical protein [Ricinus comm...    61   5e-16
ref|XP_004141917.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...    57   4e-14
ref|XP_004141918.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...    57   4e-14
ref|XP_004141920.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...    57   4e-14
ref|XP_002277554.1| PREDICTED: eukaryotic initiation factor 4A [...    55   2e-13

>ref|XP_002523570.1| conserved hypothetical protein [Ricinus communis]
           gi|223537132|gb|EEF38765.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 207

 Score = 61.2 bits (147), Expect(2) = 5e-16
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = +2

Query: 113 PNSPSSFSPQRHFYLAVDRLQYKMETLVDLLGMAGRRRGACQWLC 247
           P SPS+ S  RHFY+AVDRL +KMETLV+LLG+AGRR G    +C
Sbjct: 10  PQSPSNPSQPRHFYVAVDRLHFKMETLVELLGVAGRRSGLPMVVC 54



 Score = 47.8 bits (112), Expect(2) = 5e-16
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +1

Query: 229 GLPMAVCCNTRDELDAVCYALSNLSHLCSTPLY 327
           GLPM VCC++RDELDAVC  +SNL ++    LY
Sbjct: 48  GLPMVVCCSSRDELDAVCSVVSNLPYISFASLY 80


>ref|XP_004141917.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 1 [Cucumis
           sativus] gi|449530827|ref|XP_004172393.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 1 [Cucumis
           sativus]
          Length = 233

 Score = 56.6 bits (135), Expect(2) = 4e-14
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +2

Query: 116 NSPSSFSPQRHFYLAVDRLQYKMETLVDLLGMAGRRRGACQWLC 247
           +S S FS QRHFY+AVDRLQ+KMETLV LL +AGRR      +C
Sbjct: 14  HSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVC 57



 Score = 45.8 bits (107), Expect(2) = 4e-14
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +1

Query: 232 LPMAVCCNTRDELDAVCYALSNLSHLCSTPLY 327
           LPM VCC++RDELD+VC A+SNL ++    LY
Sbjct: 52  LPMVVCCSSRDELDSVCSAVSNLHYISLASLY 83


>ref|XP_004141918.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 2 [Cucumis
           sativus] gi|449448330|ref|XP_004141919.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 3 [Cucumis
           sativus] gi|449530829|ref|XP_004172394.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 2 [Cucumis
           sativus]
          Length = 211

 Score = 56.6 bits (135), Expect(2) = 4e-14
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +2

Query: 116 NSPSSFSPQRHFYLAVDRLQYKMETLVDLLGMAGRRRGACQWLC 247
           +S S FS QRHFY+AVDRLQ+KMETLV LL +AGRR      +C
Sbjct: 14  HSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVC 57



 Score = 45.8 bits (107), Expect(2) = 4e-14
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +1

Query: 232 LPMAVCCNTRDELDAVCYALSNLSHLCSTPLY 327
           LPM VCC++RDELD+VC A+SNL ++    LY
Sbjct: 52  LPMVVCCSSRDELDSVCSAVSNLHYISLASLY 83


>ref|XP_004141920.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 4 [Cucumis
           sativus] gi|449530831|ref|XP_004172395.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 3 [Cucumis
           sativus]
          Length = 208

 Score = 56.6 bits (135), Expect(2) = 4e-14
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +2

Query: 116 NSPSSFSPQRHFYLAVDRLQYKMETLVDLLGMAGRRRGACQWLC 247
           +S S FS QRHFY+AVDRLQ+KMETLV LL +AGRR      +C
Sbjct: 14  HSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVC 57



 Score = 45.8 bits (107), Expect(2) = 4e-14
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +1

Query: 232 LPMAVCCNTRDELDAVCYALSNLSHLCSTPLY 327
           LPM VCC++RDELD+VC A+SNL ++    LY
Sbjct: 52  LPMVVCCSSRDELDSVCSAVSNLHYISLASLY 83


>ref|XP_002277554.1| PREDICTED: eukaryotic initiation factor 4A [Vitis vinifera]
           gi|296082429|emb|CBI21434.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score = 54.7 bits (130), Expect(2) = 2e-13
 Identities = 28/43 (65%), Positives = 31/43 (72%)
 Frame = +2

Query: 95  EAECALPNSPSSFSPQRHFYLAVDRLQYKMETLVDLLGMAGRR 223
           EA   L  SPS  S QRHFY+AVDR Q+KMETLVDLL +A  R
Sbjct: 7   EASSPLSPSPSHSSQQRHFYVAVDRPQFKMETLVDLLELASHR 49



 Score = 45.8 bits (107), Expect(2) = 2e-13
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = +1

Query: 232 LPMAVCCNTRDELDAVCYALSNLSHLCSTPLY 327
           LP+AVCC++RDELDAVC A+SNL  +    LY
Sbjct: 52  LPIAVCCSSRDELDAVCSAVSNLPFISLASLY 83


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