BLASTX nr result

ID: Bupleurum21_contig00027855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027855
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26704.3| unnamed protein product [Vitis vinifera]              153   3e-35
ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|2...   148   9e-34
ref|XP_002531205.1| conserved hypothetical protein [Ricinus comm...   132   4e-29
ref|XP_003519600.1| PREDICTED: uncharacterized protein LOC100807...   118   1e-24
ref|XP_003617651.1| PHD finger protein [Medicago truncatula] gi|...   117   1e-24

>emb|CBI26704.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  153 bits (386), Expect = 3e-35
 Identities = 88/175 (50%), Positives = 118/175 (67%), Gaps = 7/175 (4%)
 Frame = -2

Query: 526 VEARSVKKAKNGGELS------GNLKRVAEIVLVLETMGKIRGGRIPSQAEIDMMSEARE 365
           VEARS + A++ GE +      G++KRVAEIVLVL  M  +RGGR P+  E  MM EAR 
Sbjct: 8   VEARSKRPAEDDGETARKRPRGGDVKRVAEIVLVLSAMAAVRGGRSPTAEERAMMEEARA 67

Query: 364 KLVEVCQVFAPKDVFPSDAFGLVIDDLGLSKISEKRLDFRPPPDVSIADKLKLTQEKMKK 185
           K+V +C+  APKD+ P +  G +I+DLG+S   E++L FR PP +SIA+KL LT+ KM++
Sbjct: 68  KVVAMCEGLAPKDIVPREVIGGMIEDLGISG-REQKLGFR-PPKMSIAEKLLLTKRKMEE 125

Query: 184 SEEFAVHSASYTSQRGKSSVAAAAES-GTSHPIRMLSSDKPSHVSSASVGLQPAS 23
           S+EF  HSA+Y+SQR +S+  +  ES G  H  RM  SDKP H   +S G QPAS
Sbjct: 126 SKEFVAHSATYSSQRLQSTFGSPTESRGPQHTARMFPSDKPGHPPISSGGFQPAS 180


>ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|222846100|gb|EEE83647.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score =  148 bits (373), Expect = 9e-34
 Identities = 91/190 (47%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
 Frame = -2

Query: 586 RSEDLTASVGEKRVAVSDGEVEARSVKKAKNGGELSGNLKRVAEIVLVLETMGKIRGGRI 407
           +S+  T  V EKR  + + E E  + K+AKNG    G +++VAEIVLVL  M  +RGG+ 
Sbjct: 15  QSDGETDLVSEKR-QMENVESEELAAKRAKNG---VGEIRKVAEIVLVLSAMAGMRGGKN 70

Query: 406 PSQAEIDMMSEAREKLVEVCQVFAPKDVFPSDAFGLVIDDLGLS-KISEKRLDFRPPPDV 230
           P+ AE+ +M EAREKLVE+CQ  +PKD+   D+ G VI+DLGL+ K+ ++RL FR    +
Sbjct: 71  PTDAEVRLMEEAREKLVEICQDLSPKDLVARDSIGTVIEDLGLNFKLKDQRLGFR-GSRL 129

Query: 229 SIADKLKLTQEKMKKSEEFAVHSASYTSQRGKSSVAAAAES-GTSHPIRMLSSDKPSHVS 53
           SI +KL L++ KM++S++FA  SA+YT+Q  + S  A  ES G SH  R+L SDKPS++S
Sbjct: 130 SIKEKLSLSKRKMEESKKFAAPSATYTTQITQPSFGAMPESHGPSHAFRVLPSDKPSNIS 189

Query: 52  SASVGLQPAS 23
            +S G+ PAS
Sbjct: 190 VSS-GIFPAS 198


>ref|XP_002531205.1| conserved hypothetical protein [Ricinus communis]
           gi|223529207|gb|EEF31182.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 892

 Score =  132 bits (333), Expect = 4e-29
 Identities = 81/177 (45%), Positives = 116/177 (65%), Gaps = 12/177 (6%)
 Frame = -2

Query: 532 GEVEARSVKKAKNGGELSGNLKRVAEIVLVLETMGKIRGGRIPSQAEIDMMSEAREKLVE 353
           GE+  R+VKKA++    +G ++RVAEIVLVL  M  +RGG+ P++ E+ +M EAR KLVE
Sbjct: 38  GELGFRTVKKARSA---TGEMQRVAEIVLVLSAMAGMRGGKNPTETEVKLMEEARAKLVE 94

Query: 352 VCQVFAPKDVFPSDAFGLVIDDLGL-SKISEKRL-DFR-PPPDVSIADKLKLTQEKMKKS 182
           +CQ + P D+   DA G VI+DLGL SK+ ++RL  FR P   +SI +K+   ++KM+ S
Sbjct: 95  ICQDWKPNDLVARDAIGSVIEDLGLNSKLKDQRLGQFRGPNTRLSIKEKISFAKKKMEDS 154

Query: 181 EEFAVHSASYTSQRGKSSVAAAAE-SGTSHPIRMLSSDKP--------SHVSSASVG 38
           ++F   SA+YTSQ  + S  A  E  G SH IR+ SSDKP        SH +S+++G
Sbjct: 155 KKFPAPSATYTSQISQPSFGAMGEVCGPSHSIRVFSSDKPTNPLLPSGSHPTSSALG 211


>ref|XP_003519600.1| PREDICTED: uncharacterized protein LOC100807139 [Glycine max]
          Length = 830

 Score =  118 bits (295), Expect = 1e-24
 Identities = 71/171 (41%), Positives = 108/171 (63%), Gaps = 5/171 (2%)
 Frame = -2

Query: 535 DGEVEARSVKKAKNGGELSGNLKRVAEIVLVLETMGKIRGGRIPSQAEIDMMSEAREKLV 356
           +G  + R  KK K   +    LKRVAEIVLVL TM  +R GR PS AE+++M EAR KL 
Sbjct: 22  NGYSDERCAKKPKF--DEGAELKRVAEIVLVLSTMATVRAGRKPSDAEVELMREARAKLA 79

Query: 355 EVCQVFAPKDVFPSDAFGLVIDDLGL-SKISEKRLDFRPPPDVSIADKLKLTQEKMKKSE 179
            +C+  APKD+   +A G VI+DLGL SK+ ++RL FR  P +SIA++    + KM++++
Sbjct: 80  SLCEGLAPKDIVAGEAIGTVIEDLGLNSKLKDQRLGFR-TPKMSIAERYSHAKWKMEEAK 138

Query: 178 EFAVH---SASYTSQRGKSSVAAAAESGT-SHPIRMLSSDKPSHVSSASVG 38
           +F+     S ++TSQ  ++++    ++   SH +R+  SDK SH +  S+G
Sbjct: 139 KFSASSTPSTTHTSQPLQTNIGGPVDNRVPSHVVRIFPSDKSSHPAIPSMG 189


>ref|XP_003617651.1| PHD finger protein [Medicago truncatula]
           gi|355518986|gb|AET00610.1| PHD finger protein [Medicago
           truncatula]
          Length = 874

 Score =  117 bits (294), Expect = 1e-24
 Identities = 71/164 (43%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
 Frame = -2

Query: 523 EARSVKKAK--NGGELSGNLKRVAEIVLVLETMGKIRGGRIPSQAEIDMMSEAREKLVEV 350
           E R  KKAK          LKRVAEIVLVL TM  +R G+ P+  E+++M EAR KL  +
Sbjct: 26  EERLSKKAKVEENENSEAELKRVAEIVLVLSTMATMRSGKKPTDVEVELMREARTKLAVL 85

Query: 349 CQVFAPKDVFPSDAFGLVIDDLGL-SKISEKRLDFRPPPDVSIADKLKLTQEKMKKSEEF 173
           CQ  APKD+   +A G VIDDLGL +K+ ++RL FR  P +SIA+K    + KM++S++ 
Sbjct: 86  CQGIAPKDIVGGEAIGSVIDDLGLNAKVVDQRLGFR-VPKMSIAEKYLFAKSKMEESKKC 144

Query: 172 AVHSASYTSQRGKSSVAAAAESGT-SHPIRMLSSDKPSHVSSAS 44
           A  S +YTSQ  +++     ++   +  +RM +SDK +H S  S
Sbjct: 145 AAPSTTYTSQPFQTNTGGMVDNRVPTTAVRMFASDKSNHTSMPS 188


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