BLASTX nr result

ID: Bupleurum21_contig00027846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027846
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531197.1| Protein grpE, putative [Ricinus communis] gi...    95   7e-18
ref|XP_002277588.2| PREDICTED: protein grpE-like [Vitis vinifera...    86   2e-15
emb|CAN76715.1| hypothetical protein VITISV_018795 [Vitis vinifera]    81   1e-13
gb|AAC72387.1| chaperone GrpE type 2 [Nicotiana tabacum]               79   5e-13
dbj|BAA13686.1| AR192 [Arabidopsis thaliana]                           78   9e-13

>ref|XP_002531197.1| Protein grpE, putative [Ricinus communis]
           gi|223529199|gb|EEF31174.1| Protein grpE, putative
           [Ricinus communis]
          Length = 308

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 62/148 (41%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
 Frame = +3

Query: 33  SAAPATLLSSGRLQQQKLLHVYDQSHSL---SFNTVVGCHVSLFHNSTLNPYSFQRPGFS 203
           S    +LL     Q+Q+L    +Q  SL   + N  V   VSLFH+S  +   FQR GF+
Sbjct: 14  SVGRRSLLLLSPSQKQQLPIFSNQIESLVHVNSNQFVAGQVSLFHHSAFSSSPFQRFGFT 73

Query: 204 TAASPEPDEKDASKNTETASSNASEQDEVCDQTKTAAPGSTSDPEQESGSDDDLSVENLE 383
           ++ASPE +EK+ S     A S   E +     TK     S    E +S ++ DLS+++L 
Sbjct: 74  SSASPEANEKEGSTAENNADSTNVEPETSNGDTKP----SNETREPDSDTEGDLSMDDLV 129

Query: 384 KLVAEKDEILKAKNKQIETMKDKVLRTY 467
           KLVAEK+E+LK K+K+IE M+DKVLRTY
Sbjct: 130 KLVAEKEELLKLKHKEIEKMQDKVLRTY 157


>ref|XP_002277588.2| PREDICTED: protein grpE-like [Vitis vinifera]
           gi|297737494|emb|CBI26695.3| unnamed protein product
           [Vitis vinifera]
          Length = 298

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 61/146 (41%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
 Frame = +3

Query: 48  TLLSSGRLQQQKLLHVYDQSHSLSF------NTVVGCHVSLFHNSTLNPYSFQRPGFSTA 209
           TLL+ GR        +  QSH  +F      + VV   VSL H+   N   FQR G S++
Sbjct: 13  TLLAQGRTSSL----LAPQSHLNTFLIGESTDKVVATQVSLLHHLVHNASIFQRFGISSS 68

Query: 210 ASPEPDEKDASKNTETASSNASEQDEVCDQTKTAAPGSTSDPEQESGSDDDLSVENLEKL 389
           ASP+ +EK+      T S N     E       A P  T+  E ES S+ DLS+++L KL
Sbjct: 69  ASPQTNEKET-----TQSGNEQGTVENDGAPADAEPAKTNQAE-ESDSEADLSMDDLMKL 122

Query: 390 VAEKDEILKAKNKQIETMKDKVLRTY 467
           V EK+E+LK KNK+IE M+DKVLR+Y
Sbjct: 123 VLEKEELLKMKNKEIEKMQDKVLRSY 148


>emb|CAN76715.1| hypothetical protein VITISV_018795 [Vitis vinifera]
          Length = 413

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 26/166 (15%)
 Frame = +3

Query: 48  TLLSSGRLQQQKLLHVYDQSHSLSF------NTVVGCHVSLFHNSTLNPYSFQRPGFSTA 209
           TLL+ GR        +  QSH  +F      + VV   VSL H+   N   FQR G S++
Sbjct: 102 TLLAQGRTSSL----LAPQSHLNTFLIGESTDKVVATQVSLLHHLVHNASIFQRFGISSS 157

Query: 210 ASPEPDEKDASKN---------------TETASSNASEQDEV-----CDQTKTAAPGSTS 329
           ASP+ +EK+ +++                E A +N +E+         +  K    G+  
Sbjct: 158 ASPQTNEKETTQSGNEQGTVENDGAPADAEPAKTNQAEESGYNSKPQSESVKRRRRGTKR 217

Query: 330 DPEQESGSDDDLSVENLEKLVAEKDEILKAKNKQIETMKDKVLRTY 467
               +S S+ DLS+++L KLV EK+E+LK KNK+IE M+DKVLR+Y
Sbjct: 218 TAFSDSDSEADLSMDDLMKLVVEKEELLKMKNKEIEKMQDKVLRSY 263


>gb|AAC72387.1| chaperone GrpE type 2 [Nicotiana tabacum]
          Length = 304

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
 Frame = +3

Query: 30  NSAAPATLLSSGRLQQQKLLHVYD-QSHSL-SFNTVVGCHVSLFHNSTLNPYSFQRPGFS 203
           N    + LL S   Q+Q+ + V   Q HSL  F       VSLFH S L     QR G S
Sbjct: 16  NQCRSSVLLYSREQQRQQHVPVLAFQFHSLRDFKE----KVSLFHESAL-----QRFGIS 66

Query: 204 TAASPEPDEKDASKNTETASSNASEQDEVCDQTKTAAPGSTSDPEQESGSDDDLSVENLE 383
           ++ASP+P+EK++S++     S     D  C+ + +A   S    E++    +DLS ++L 
Sbjct: 67  SSASPQPNEKESSQSQSEPGSTKENGD--CEASVSA--DSHVQDEKDESDTEDLSRDDLV 122

Query: 384 KLVAEKDEILKAKNKQIETMKDKVLRTY 467
           KLVAEK+E+LK K+ + + M+DKVLRTY
Sbjct: 123 KLVAEKEELLKMKDGEFQKMQDKVLRTY 150


>dbj|BAA13686.1| AR192 [Arabidopsis thaliana]
          Length = 273

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 51/119 (42%), Positives = 73/119 (61%), Gaps = 17/119 (14%)
 Frame = +3

Query: 162 STLNPYSFQRPGFSTAASPEPDEK----DASKNTE---TASSN-----ASEQDEVCDQTK 305
           S ++ ++ QR  FS++ SPE DEK    +ASK +E   TA +N     +  +D V D  K
Sbjct: 2   SMMDSFALQRFNFSSSTSPESDEKKTHTEASKTSEEKPTAEANQPGLDSESKDSVTDSAK 61

Query: 306 TAAPGS----TSDPEQESGSDDD-LSVENLEKLVAEKDEILKAKNKQIETMKDKVLRTY 467
               G+    +S  E +S SDDD LS ++L KLVAEK+E+L  K ++I+ +KDKVLRTY
Sbjct: 62  RKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRTY 120


Top