BLASTX nr result

ID: Bupleurum21_contig00027837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027837
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago ...    70   7e-11
ref|XP_003636511.1| hypothetical protein MTR_043s0014 [Medicago ...    69   4e-10
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    65   7e-09
ref|XP_003609437.1| hypothetical protein MTR_4g115700 [Medicago ...    62   4e-08
ref|XP_003622056.1| hypothetical protein MTR_7g026730 [Medicago ...    62   6e-08

>ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago truncatula]
           gi|355505768|gb|AES86910.1| hypothetical protein
           MTR_4g016830 [Medicago truncatula]
          Length = 108

 Score = 70.5 bits (171), Expect(2) = 7e-11
 Identities = 34/76 (44%), Positives = 48/76 (63%)
 Frame = -2

Query: 360 ISVFEAEAVGVLEVLKWGIELGLQKVQLETDSMLTVQAIKNNRENLMEVGNVL*ECRALL 181
           ++V EAEA  + E +K  I LG Q V+ ETD M    AI     +L EVG+++ +CR LL
Sbjct: 1   MTVLEAEATALSEAIKLAISLGFQTVRFETDCMTLADAIHTTSAHLNEVGDIISQCRGLL 60

Query: 180 RTQQDFSISFVRKQAN 133
            T  DF +S++R+QAN
Sbjct: 61  FTNTDFKVSYIRRQAN 76



 Score = 21.2 bits (43), Expect(2) = 7e-11
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 127 QANNVAHMIAR 95
           QAN VAH IAR
Sbjct: 74  QANRVAHSIAR 84


>ref|XP_003636511.1| hypothetical protein MTR_043s0014 [Medicago truncatula]
           gi|355502446|gb|AES83649.1| hypothetical protein
           MTR_043s0014 [Medicago truncatula]
          Length = 132

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/72 (47%), Positives = 47/72 (65%)
 Frame = -2

Query: 348 EAEAVGVLEVLKWGIELGLQKVQLETDSMLTVQAIKNNRENLMEVGNVL*ECRALLRTQQ 169
           EAEA+G+ + + W  ELGL  VQ+E D  L V +I  N  N  + GN++  CR+LL   +
Sbjct: 26  EAEALGLKDTIVWLGELGLSMVQIELDCKLVVDSIMENSNNQSDFGNIISSCRSLLNQFR 85

Query: 168 DFSISFVRKQAN 133
           +F ISFVR+QAN
Sbjct: 86  NFKISFVRRQAN 97


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/72 (45%), Positives = 47/72 (65%)
 Frame = -2

Query: 348 EAEAVGVLEVLKWGIELGLQKVQLETDSMLTVQAIKNNRENLMEVGNVL*ECRALLRTQQ 169
           EAEAVG+ + + W  +L L  VQLE D  L V +I +   N  E G+++ +CR+LL+   
Sbjct: 109 EAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFT 168

Query: 168 DFSISFVRKQAN 133
           +F ISFVR+QAN
Sbjct: 169 NFKISFVRRQAN 180


>ref|XP_003609437.1| hypothetical protein MTR_4g115700 [Medicago truncatula]
           gi|355510492|gb|AES91634.1| hypothetical protein
           MTR_4g115700 [Medicago truncatula]
          Length = 111

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/72 (43%), Positives = 47/72 (65%)
 Frame = -2

Query: 348 EAEAVGVLEVLKWGIELGLQKVQLETDSMLTVQAIKNNRENLMEVGNVL*ECRALLRTQQ 169
           EAEA+G+ + + W   LG+ KV +E D  L V++I +  ++  E GN+L  CR LL+   
Sbjct: 13  EAEALGLRDAIIWLGHLGMSKVHIELDCKLVVESIGDRTKDQSEFGNILATCRDLLQHFP 72

Query: 168 DFSISFVRKQAN 133
           +F ISF+R+QAN
Sbjct: 73  NFKISFIRRQAN 84


>ref|XP_003622056.1| hypothetical protein MTR_7g026730 [Medicago truncatula]
           gi|355497071|gb|AES78274.1| hypothetical protein
           MTR_7g026730 [Medicago truncatula]
          Length = 132

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/79 (41%), Positives = 48/79 (60%)
 Frame = -2

Query: 369 EGEISVFEAEAVGVLEVLKWGIELGLQKVQLETDSMLTVQAIKNNRENLMEVGNVL*ECR 190
           EG  S  EAEA+G+ + + W   LGL KV +E    L V  I +N +N +E GN++  CR
Sbjct: 19  EGFPSPSEAEALGLRDAILWFGNLGLSKVHVELYCKLVVDNIVDNSKNELEFGNIIAICR 78

Query: 189 ALLRTQQDFSISFVRKQAN 133
            +L+   +F I+FV +QAN
Sbjct: 79  IMLQQHPNFKINFVMRQAN 97


Top