BLASTX nr result

ID: Bupleurum21_contig00027806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027806
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   204   8e-51
ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   201   4e-50
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ...   200   9e-50
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   199   2e-49
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              199   2e-49

>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
           communis] gi|223531477|gb|EEF33309.1| DNA polymerase
           epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  204 bits (518), Expect = 8e-51
 Identities = 98/104 (94%), Positives = 102/104 (98%)
 Frame = +2

Query: 2   LPKVEQQLKLKDRLKKYCQKAYKRVLNKPVTELREAGICMRENPFYVDTVRSFRDRRYEY 181
           LPKVEQQ KLK+RLKKYCQKAYKRV++KPVTELREAGICMRENPFYVDTVRSFRDRRYEY
Sbjct: 683 LPKVEQQSKLKERLKKYCQKAYKRVIDKPVTELREAGICMRENPFYVDTVRSFRDRRYEY 742

Query: 182 KGLNKVWKGKLSEAKASGNPIKIQEAQDMVVLYDSLQLAHKCIL 313
           KGLNK+WKGKLSEAK SGNPIKIQEAQDMVVLYDSLQLAHKCIL
Sbjct: 743 KGLNKLWKGKLSEAKTSGNPIKIQEAQDMVVLYDSLQLAHKCIL 786


>ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A-like [Glycine max]
          Length = 2205

 Score =  201 bits (512), Expect = 4e-50
 Identities = 98/104 (94%), Positives = 101/104 (97%)
 Frame = +2

Query: 2    LPKVEQQLKLKDRLKKYCQKAYKRVLNKPVTELREAGICMRENPFYVDTVRSFRDRRYEY 181
            LPK EQQ +LK+RLKKYCQKAYKRVL+KPVTELREAGICMRENPFYVDTVRSFRDRRYEY
Sbjct: 691  LPKAEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEY 750

Query: 182  KGLNKVWKGKLSEAKASGNPIKIQEAQDMVVLYDSLQLAHKCIL 313
            KGLNKVWKGKLSEAKASGN IKIQEAQDMVVLYDSLQLAHKCIL
Sbjct: 751  KGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCIL 794


>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
            max]
          Length = 2207

 Score =  200 bits (509), Expect = 9e-50
 Identities = 97/104 (93%), Positives = 101/104 (97%)
 Frame = +2

Query: 2    LPKVEQQLKLKDRLKKYCQKAYKRVLNKPVTELREAGICMRENPFYVDTVRSFRDRRYEY 181
            LPK EQQ +LK+RLKKYCQKAYKRVL+KPVTELREAGICMRENPFYVDTVRSFRDRRYEY
Sbjct: 692  LPKAEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEY 751

Query: 182  KGLNKVWKGKLSEAKASGNPIKIQEAQDMVVLYDSLQLAHKCIL 313
            KGLNKVWKGKLSEAKASGN +KIQEAQDMVVLYDSLQLAHKCIL
Sbjct: 752  KGLNKVWKGKLSEAKASGNSMKIQEAQDMVVLYDSLQLAHKCIL 795


>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
           vinifera]
          Length = 2214

 Score =  199 bits (505), Expect = 2e-49
 Identities = 96/104 (92%), Positives = 100/104 (96%)
 Frame = +2

Query: 2   LPKVEQQLKLKDRLKKYCQKAYKRVLNKPVTELREAGICMRENPFYVDTVRSFRDRRYEY 181
           LPK EQQLKLK+RLKKYCQKAYKRVL+KP TELREAGICMREN FY+DTVRSFRDRRYEY
Sbjct: 681 LPKTEQQLKLKERLKKYCQKAYKRVLDKPATELREAGICMRENSFYIDTVRSFRDRRYEY 740

Query: 182 KGLNKVWKGKLSEAKASGNPIKIQEAQDMVVLYDSLQLAHKCIL 313
           KGLNKVWKGKLSEAKASGN I+IQEAQDMVVLYDSLQLAHKCIL
Sbjct: 741 KGLNKVWKGKLSEAKASGNSIRIQEAQDMVVLYDSLQLAHKCIL 784


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  199 bits (505), Expect = 2e-49
 Identities = 96/104 (92%), Positives = 100/104 (96%)
 Frame = +2

Query: 2    LPKVEQQLKLKDRLKKYCQKAYKRVLNKPVTELREAGICMRENPFYVDTVRSFRDRRYEY 181
            LPK EQQLKLK+RLKKYCQKAYKRVL+KP TELREAGICMREN FY+DTVRSFRDRRYEY
Sbjct: 1155 LPKTEQQLKLKERLKKYCQKAYKRVLDKPATELREAGICMRENSFYIDTVRSFRDRRYEY 1214

Query: 182  KGLNKVWKGKLSEAKASGNPIKIQEAQDMVVLYDSLQLAHKCIL 313
            KGLNKVWKGKLSEAKASGN I+IQEAQDMVVLYDSLQLAHKCIL
Sbjct: 1215 KGLNKVWKGKLSEAKASGNSIRIQEAQDMVVLYDSLQLAHKCIL 1258


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