BLASTX nr result

ID: Bupleurum21_contig00027793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027793
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303565.1| GRAS family transcription factor [Populus tr...   401   e-109
ref|XP_002299559.1| GRAS family transcription factor [Populus tr...   397   e-108
ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis ...   395   e-108
ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus commun...   391   e-106
gb|AFH54533.1| GRAS family protein, partial [Dimocarpus longan]       388   e-105

>ref|XP_002303565.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222840997|gb|EEE78544.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 665

 Score =  401 bits (1030), Expect = e-109
 Identities = 203/295 (68%), Positives = 231/295 (78%)
 Frame = +1

Query: 1    CFSPNVVITPPLPLPNNAWVNSTVTEIHKLGEENVEPSQGVVKXXXXXXXXXXXXXXXXI 180
            CF P+ VI+PPLPL NN WV+S +TEI  LGE+  E SQ  VK                +
Sbjct: 184  CFVPSEVISPPLPLSNNPWVDSVITEIADLGEKYGESSQRPVKEASGSSTSSESQSLG-L 242

Query: 181  RLNENVSEHEIGNGSRPHNPNAGVGFVAGGSGNNGDHDGFELISLLVACIEAMELKNIEG 360
            RL+ENV EHE+G GS  + P+   G V     +  +H GFEL+S L AC+E + LKNI  
Sbjct: 243  RLSENVVEHEVGKGSS-NPPHPQEGAVEAAEDDQREHQGFELVSFLTACVEEIGLKNIAS 301

Query: 361  VNHFIAKLGELASPRGSSVSRLTAYYTEALALRVARVWPHIFHITPPRELNLVEDESGTA 540
            +NHFIAKLGELASP+G  +SRL AYYTEALALRV R+WPHIFHIT PREL+ V+D+SGTA
Sbjct: 302  INHFIAKLGELASPKGIPISRLAAYYTEALALRVTRIWPHIFHITAPRELDRVDDDSGTA 361

Query: 541  LRLWNQVSPIPQFIHFTSNEILLRGFEGKDKVHIIDFDIKQGLQWPSLFQSLAFRNNPPS 720
            LRL NQVSPIP+FIHFT+NE+LLR FEGKD+VHIIDFDI+QGLQWPSLFQSLA R NPPS
Sbjct: 362  LRLLNQVSPIPKFIHFTANEMLLRAFEGKDRVHIIDFDIRQGLQWPSLFQSLASRTNPPS 421

Query: 721  HVRITGIGESKQELIETGERLAGFAGALNLPFEFHPVVDRLEDVRLWMLHVKEGE 885
            HVRITGIGESKQEL ETG+RLAGFA ALNLPFEFHPVVDRLEDVRLWMLHVKE E
Sbjct: 422  HVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKERE 476


>ref|XP_002299559.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222846817|gb|EEE84364.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 666

 Score =  397 bits (1021), Expect = e-108
 Identities = 202/294 (68%), Positives = 231/294 (78%)
 Frame = +1

Query: 4    FSPNVVITPPLPLPNNAWVNSTVTEIHKLGEENVEPSQGVVKXXXXXXXXXXXXXXXXIR 183
            F P+ VI+PPLPL NN WV S +TEI  LGE++ E SQ  VK                +R
Sbjct: 186  FVPSEVISPPLPLSNNPWVGSVITEITDLGEKDGESSQRPVKEASGSSTSSESQSLG-LR 244

Query: 184  LNENVSEHEIGNGSRPHNPNAGVGFVAGGSGNNGDHDGFELISLLVACIEAMELKNIEGV 363
            L+ENV E E+GNGSR  +P  G    A  +    +  GFEL+SLL AC+EA+ LKNI G+
Sbjct: 245  LSENVVEQEVGNGSRNPHPQEGAAMEAAETDQR-EFQGFELVSLLTACVEAITLKNIAGI 303

Query: 364  NHFIAKLGELASPRGSSVSRLTAYYTEALALRVARVWPHIFHITPPRELNLVEDESGTAL 543
            NHF+A+LG LASP+G  +SRL AYYTEALALRV R+WPHIFHIT PREL+ V+D+SGTAL
Sbjct: 304  NHFLAELGGLASPKGIPISRLAAYYTEALALRVTRLWPHIFHITAPRELDRVDDDSGTAL 363

Query: 544  RLWNQVSPIPQFIHFTSNEILLRGFEGKDKVHIIDFDIKQGLQWPSLFQSLAFRNNPPSH 723
            RL NQVSPIP+FIHFT+NE+LLR FEGKD+VHIIDFDIKQGLQWP+LFQSLA R NPPSH
Sbjct: 364  RLLNQVSPIPKFIHFTANEMLLRAFEGKDRVHIIDFDIKQGLQWPTLFQSLASRTNPPSH 423

Query: 724  VRITGIGESKQELIETGERLAGFAGALNLPFEFHPVVDRLEDVRLWMLHVKEGE 885
            VRITGIGESKQEL ETG+RLAGFA ALNLPFEFHPVVDRLEDVRLWMLHVKE E
Sbjct: 424  VRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKERE 477


>ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis vinifera]
          Length = 676

 Score =  395 bits (1014), Expect = e-108
 Identities = 197/295 (66%), Positives = 232/295 (78%)
 Frame = +1

Query: 1    CFSPNVVITPPLPLPNNAWVNSTVTEIHKLGEENVEPSQGVVKXXXXXXXXXXXXXXXXI 180
            CF P+ VI+PPLPL NN W+ S VTEI  LG+ ++E S GVVK                +
Sbjct: 195  CFVPSEVISPPLPLSNNPWLESVVTEITSLGDNDLETSHGVVKEASGSSNSSESHPLA-L 253

Query: 181  RLNENVSEHEIGNGSRPHNPNAGVGFVAGGSGNNGDHDGFELISLLVACIEAMELKNIEG 360
            RL+E+  E EIGNGS   + + G         N G+H GFELISLL+AC+EA+  +NI  
Sbjct: 254  RLHESTVEQEIGNGSSLPHLHEGPKMSGDDENNQGEHQGFELISLLMACVEAIGSRNIAA 313

Query: 361  VNHFIAKLGELASPRGSSVSRLTAYYTEALALRVARVWPHIFHITPPRELNLVEDESGTA 540
            ++HFIAKLG+LASP+GS +SR+TAY+TEALALRV+R+WP IFH+T PREL+  +D++ TA
Sbjct: 314  ISHFIAKLGDLASPKGSPISRVTAYFTEALALRVSRLWPAIFHVTTPRELDRADDDTWTA 373

Query: 541  LRLWNQVSPIPQFIHFTSNEILLRGFEGKDKVHIIDFDIKQGLQWPSLFQSLAFRNNPPS 720
            LRL NQVSPIP+FIHFTSNEILLR FEGKD+VHIIDFDIKQGLQWPSLFQSLA R NPPS
Sbjct: 374  LRLLNQVSPIPKFIHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPS 433

Query: 721  HVRITGIGESKQELIETGERLAGFAGALNLPFEFHPVVDRLEDVRLWMLHVKEGE 885
            HVRITG+GESKQEL ETG+RLAGFA ALNLPFEFHPVVDRLEDVRLWMLHVK+ E
Sbjct: 434  HVRITGVGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKDKE 488


>ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus communis]
            gi|223549613|gb|EEF51101.1| DELLA protein RGL1, putative
            [Ricinus communis]
          Length = 662

 Score =  391 bits (1004), Expect = e-106
 Identities = 195/294 (66%), Positives = 229/294 (77%)
 Frame = +1

Query: 4    FSPNVVITPPLPLPNNAWVNSTVTEIHKLGEENVEPSQGVVKXXXXXXXXXXXXXXXXIR 183
            F P+ VI+PPLPL NN W+ S +TEI  LGE++ E SQ  V                 +R
Sbjct: 181  FVPSDVISPPLPLSNNPWMESVITEITDLGEKDGESSQRPVIKDASGSSTSSESHSLGLR 240

Query: 184  LNENVSEHEIGNGSRPHNPNAGVGFVAGGSGNNGDHDGFELISLLVACIEAMELKNIEGV 363
             +ENV E+E+GNGSR  +P  G    A G+ +  ++  +EL+SLL AC+EA+  KN+  +
Sbjct: 241  PSENVVEYEVGNGSRNPHPQEGTTEEAAGANHQEEYQAYELVSLLTACVEAIGSKNMAVI 300

Query: 364  NHFIAKLGELASPRGSSVSRLTAYYTEALALRVARVWPHIFHITPPRELNLVEDESGTAL 543
            NH IAKLGEL+SP+G++VSRL AYYTEALALRV R+WPHIFHI+ PR+ + V+D+SGTA 
Sbjct: 301  NHCIAKLGELSSPKGTAVSRLIAYYTEALALRVTRLWPHIFHISTPRDFDRVDDDSGTAW 360

Query: 544  RLWNQVSPIPQFIHFTSNEILLRGFEGKDKVHIIDFDIKQGLQWPSLFQSLAFRNNPPSH 723
            RL NQV+PIP+FIHFT NEI LR FEGKDKVHIIDFDIKQGLQWPSLFQSLA R NPPSH
Sbjct: 361  RLLNQVNPIPKFIHFTENEIFLRAFEGKDKVHIIDFDIKQGLQWPSLFQSLASRTNPPSH 420

Query: 724  VRITGIGESKQELIETGERLAGFAGALNLPFEFHPVVDRLEDVRLWMLHVKEGE 885
            VRITGIGESKQEL ETG+RLAGFA ALNLPFEFHPVVDRLEDVRLWMLHVKEGE
Sbjct: 421  VRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEGE 474


>gb|AFH54533.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 503

 Score =  388 bits (996), Expect = e-105
 Identities = 200/301 (66%), Positives = 233/301 (77%), Gaps = 6/301 (1%)
 Frame = +1

Query: 1    CFSPNVVITPPLPLPNNAWVNSTVTEIHKLGEENV-EPSQGVVKXXXXXXXXXXXXXXXX 177
            CF P+ +I+PPLPL NN WV S +TEI    E++  E SQG+ K                
Sbjct: 183  CFVPSELISPPLPLSNNPWVESVITEITDFREKDGDETSQGLGKEVSGSSASSESHSLS- 241

Query: 178  IRLNENVSEHEIGNGSR---PHN-PNAGVGFVAGGSGNNGDH-DGFELISLLVACIEAME 342
            +RL+EN +EH++GNGSR   PH     GVG  A    NN D   G EL+SLL AC+EA+ 
Sbjct: 242  LRLHENPAEHDVGNGSRNPYPHQGAGVGVGVHASEEDNNQDETQGLELVSLLTACVEAIG 301

Query: 343  LKNIEGVNHFIAKLGELASPRGSSVSRLTAYYTEALALRVARVWPHIFHITPPRELNLVE 522
             +NI  +NHFIA+LG+LASPRGS +SRLTAYYTEALALRV R+WP  FHITPPR+L+ ++
Sbjct: 302  SRNIAAINHFIARLGDLASPRGSPISRLTAYYTEALALRVTRLWPQTFHITPPRDLDRLD 361

Query: 523  DESGTALRLWNQVSPIPQFIHFTSNEILLRGFEGKDKVHIIDFDIKQGLQWPSLFQSLAF 702
            D+SGTALRL NQV+PIP+FIHFT+NEILLR FEG+D+VHIIDFDIKQGLQWPS FQSLA 
Sbjct: 362  DDSGTALRLLNQVTPIPKFIHFTANEILLRAFEGQDRVHIIDFDIKQGLQWPSFFQSLAS 421

Query: 703  RNNPPSHVRITGIGESKQELIETGERLAGFAGALNLPFEFHPVVDRLEDVRLWMLHVKEG 882
            R NPPSHVRITGIGESKQEL ETG+RL+GFA ALNLPFEFHPVVDRLEDVRLWMLHVKE 
Sbjct: 422  RTNPPSHVRITGIGESKQELNETGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEK 481

Query: 883  E 885
            E
Sbjct: 482  E 482


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