BLASTX nr result

ID: Bupleurum21_contig00027775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027775
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65039.1| hypothetical protein VITISV_009459 [Vitis vinifera]    74   2e-11
ref|XP_002316103.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
emb|CBI27248.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_003613987.1| hypothetical protein MTR_5g043430 [Medicago ...    59   4e-07

>emb|CAN65039.1| hypothetical protein VITISV_009459 [Vitis vinifera]
          Length = 1250

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
 Frame = -3

Query: 339 WTEGDHSH-EFSNRSGGNSSYNHSESVVTAHISNPYPWYNSSDVANSWFHSVTSWGKPKP 163
           W E   S  E S +S G S+YNH+E  V++H+ +   +  SSD+A SW HSV+SW K   
Sbjct: 501 WRERTSSGLEISEKSQGLSNYNHAEQAVSSHLPSQCQFVFSSDLAKSWSHSVSSWEKMSS 560

Query: 162 SLTQNVTSLHNRPSYMLSETSNRDINGS----------------SRLNPGLGNKLPTQNG 31
            L+Q   S+  +P      T ++ +  S                SR NPG G+++  +NG
Sbjct: 561 GLSQKSMSIQTQPFLTSPTTLSKSLQSSAQSHGIFGHKWHLDSNSRSNPGFGSEVANRNG 620

Query: 30  FCQASQLVSK 1
           F   S   SK
Sbjct: 621 FYHGSSSGSK 630


>ref|XP_002316103.1| predicted protein [Populus trichocarpa] gi|222865143|gb|EEF02274.1|
           predicted protein [Populus trichocarpa]
          Length = 1114

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 16/121 (13%)
 Frame = -3

Query: 315 EFSNRSGGNSSYNHSESVVTAHISNPYPWYNSSDVANSWFHSVTSWGKPKPSLTQNVTSL 136
           E S R+   ++ N+SESV+ +H  +PYP    SDV   W  SV+SW  P  SL+Q   S+
Sbjct: 409 ELSERNHEIANSNYSESVIASHRPSPYPIGPPSDVGKPWCQSVSSWEMPAVSLSQKSMSV 468

Query: 135 HNRP----SYMLSETS------------NRDINGSSRLNPGLGNKLPTQNGFCQASQLVS 4
              P    S  LS +S             R+ N +S  NP   +++P +NGF   S   S
Sbjct: 469 QMHPYLNSSATLSRSSQSSTQSHGYFGDQRNYNSNSTSNPSFASEMPNRNGFYHGSSSGS 528

Query: 3   K 1
           K
Sbjct: 529 K 529


>emb|CBI27248.3| unnamed protein product [Vitis vinifera]
          Length = 891

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
 Frame = -3

Query: 339 WTEGDHSH-EFSNRSGGNSSYNHSESVVTAHISNPYPWYNSSDVANSWFHSVTSWGKPKP 163
           W E   S  E S +S G S+YNH+E  V++H+ +   +  SSD+A SW HSV+SW K   
Sbjct: 361 WRERTSSGLEISEKSQGLSNYNHAEQAVSSHLPSQCQFVFSSDLAKSWSHSVSSWEKMSS 420

Query: 162 SLTQNVTSLHNRPSYMLSETSNRDINGSSRLNPGLGNKLPTQNGFCQASQLVSK 1
            L+Q   S+  +P      T ++ +  S+        ++  +NGF   S   SK
Sbjct: 421 GLSQKSMSIQTQPFLTSPTTLSKSLQSSA--------QIANRNGFYHGSSSGSK 466


>ref|XP_003613987.1| hypothetical protein MTR_5g043430 [Medicago truncatula]
           gi|355515322|gb|AES96945.1| hypothetical protein
           MTR_5g043430 [Medicago truncatula]
          Length = 1083

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
 Frame = -3

Query: 339 WTE---GDHSHEFSNRSGGNSSYNHSESVVTAHISNPYPWYNSSDVANSWFHSVTSWGKP 169
           WTE    + +HE+S          H ESV+  H    +P   S D++ SW HS  SWG  
Sbjct: 432 WTEKTASERNHEYSVNK-------HPESVLPLHRPGLFPAAPSYDLSRSWSHSAASWGMA 484

Query: 168 KPSLTQNVTSLHNRPSYMLSETSNRD---------------INGSSRLNPGLGNKLPTQN 34
             SL+Q + S+       LS + NR+               +N +S+ NPG+   LP +N
Sbjct: 485 SCSLSQKLMSVQTPSCLNLSGSINRNFQSQQSNGRLEQCWPLNINSKPNPGIQYDLPLRN 544

Query: 33  GFCQASQLVSK 1
           GF   S   +K
Sbjct: 545 GFYPGSSSGAK 555


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