BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027767
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282394.1| PREDICTED: uncharacterized protein LOC100264...   134   9e-30
ref|NP_567560.2| Nucleic acid-binding, OB-fold-like protein [Ara...   125   4e-27
ref|XP_002870036.1| hypothetical protein ARALYDRAFT_329677 [Arab...   124   7e-27
emb|CBI18579.3| unnamed protein product [Vitis vinifera]              120   2e-25
emb|CCH47177.1| similar to signal recognition particle 54 kDa pr...   119   3e-25

>ref|XP_002282394.1| PREDICTED: uncharacterized protein LOC100264936 [Vitis vinifera]
           gi|297740124|emb|CBI30306.3| unnamed protein product
           [Vitis vinifera]
          Length = 107

 Score =  134 bits (337), Expect = 9e-30
 Identities = 70/108 (64%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
 Frame = +3

Query: 6   MDTTNPAAFVNSEILRMYXXXXXXXXXXXXXXDGGGGVIGKSCDDQQIVVKGQLPS-PLT 182
           MDT+NPA FVN E+LRMY              +GG  +IGKS D+QQ+V+KG  PS PLT
Sbjct: 1   MDTSNPAVFVNMELLRMYVGRKVRAVIQVIRSEGGV-IIGKSTDEQQLVIKGTPPSFPLT 59

Query: 183 TFVEIIGIADGPQSIRAEIGTNFGDTFDLMNYNQLCKLANGEYKHLFI 326
           TFVE+IGIAD  QSIRAEI TNFGDTFD   YNQLC+LANGEYKHLF+
Sbjct: 60  TFVEVIGIADSNQSIRAEIWTNFGDTFDTYAYNQLCQLANGEYKHLFL 107


>ref|NP_567560.2| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
           gi|45773776|gb|AAS76692.1| At4g18590 [Arabidopsis
           thaliana] gi|46359785|gb|AAS88756.1| At4g18590
           [Arabidopsis thaliana] gi|332658664|gb|AEE84064.1|
           Nucleic acid-binding, OB-fold-like protein [Arabidopsis
           thaliana]
          Length = 106

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/107 (58%), Positives = 77/107 (71%)
 Frame = +3

Query: 6   MDTTNPAAFVNSEILRMYXXXXXXXXXXXXXXDGGGGVIGKSCDDQQIVVKGQLPSPLTT 185
           MDT++PAAFVN  +LR Y              D G  VIGKS DDQQIVVKG    PLTT
Sbjct: 1   MDTSSPAAFVNGALLRRYIGQKVRAVIQVIRSDVGS-VIGKSTDDQQIVVKGSPQPPLTT 59

Query: 186 FVEIIGIADGPQSIRAEIGTNFGDTFDLMNYNQLCKLANGEYKHLFI 326
           ++E+IGIA+   +IRAE+ TNFGD+FD+ NYN+LCKLANGE++HLFI
Sbjct: 60  YLEVIGIAETDNTIRAEVWTNFGDSFDVQNYNELCKLANGEFRHLFI 106


>ref|XP_002870036.1| hypothetical protein ARALYDRAFT_329677 [Arabidopsis lyrata subsp.
           lyrata] gi|297315872|gb|EFH46295.1| hypothetical protein
           ARALYDRAFT_329677 [Arabidopsis lyrata subsp. lyrata]
          Length = 106

 Score =  124 bits (312), Expect = 7e-27
 Identities = 63/107 (58%), Positives = 76/107 (71%)
 Frame = +3

Query: 6   MDTTNPAAFVNSEILRMYXXXXXXXXXXXXXXDGGGGVIGKSCDDQQIVVKGQLPSPLTT 185
           MDT++PAAFVN  +LR Y              D G  VIGKS DDQQIVVKG    PLTT
Sbjct: 1   MDTSSPAAFVNGALLRRYIGQKVRAVIQVIRSDIGS-VIGKSTDDQQIVVKGSPNPPLTT 59

Query: 186 FVEIIGIADGPQSIRAEIGTNFGDTFDLMNYNQLCKLANGEYKHLFI 326
           ++E+IGIA+   +IRAE+ TNFGD+FD  NYN+LCKLANGE++HLFI
Sbjct: 60  YIEVIGIAETENTIRAEVWTNFGDSFDAQNYNELCKLANGEFRHLFI 106


>emb|CBI18579.3| unnamed protein product [Vitis vinifera]
          Length = 161

 Score =  120 bits (300), Expect = 2e-25
 Identities = 62/109 (56%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   DMDTTNPAAFVNSEILRMYXXXXXXXXXXXXXXDGGGGVIGKSCDDQQIVVKGQLPS-PL 179
           DMDT++PA FVN+E+LR Y              DGG  V GKS DDQQ+++KG  PS P+
Sbjct: 54  DMDTSSPAVFVNAELLRTYVGRKVRAVVQVIGFDGGV-VTGKSVDDQQLIIKGSPPSVPV 112

Query: 180 TTFVEIIGIADGPQSIRAEIGTNFGDTFDLMNYNQLCKLANGEYKHLFI 326
             ++E+IGIAD  QSIRAEI TNFG TFD  +YNQLC LANGE+K LF+
Sbjct: 113 MNYIEVIGIADSNQSIRAEIWTNFGSTFDTHSYNQLCLLANGEFKSLFL 161


>emb|CCH47177.1| similar to signal recognition particle 54 kDa protein [Lupinus
           angustifolius]
          Length = 731

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/109 (55%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   DMDTTNPAAFVNSEILRMYXXXXXXXXXXXXXXDGGGGVIGKSCDDQQIVVKGQLPS-PL 179
           +MDT+NPA FVN+E+L  Y              DGG  VIGKS D++Q+VVKG  PS P 
Sbjct: 624 NMDTSNPAVFVNAELLHFYVGRRVRAVMQVIRSDGGA-VIGKSTDEKQLVVKGSPPSVPF 682

Query: 180 TTFVEIIGIADGPQSIRAEIGTNFGDTFDLMNYNQLCKLANGEYKHLFI 326
           T FVE+IGI D  + IRAE  TNFGD  D+ +YN+LC+LANGE+KHLF+
Sbjct: 683 TNFVEVIGIVDNEKCIRAETWTNFGDAIDMFSYNKLCQLANGEFKHLFL 731