BLASTX nr result

ID: Bupleurum21_contig00027761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027761
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323027.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
emb|CBI18108.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chl...   117   7e-25
ref|XP_002879741.1| mate efflux family protein [Arabidopsis lyra...   115   4e-24
ref|NP_181367.2| MATE efflux family protein [Arabidopsis thalian...   115   5e-24

>ref|XP_002323027.1| predicted protein [Populus trichocarpa] gi|222867657|gb|EEF04788.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  125 bits (313), Expect = 5e-27
 Identities = 70/131 (53%), Positives = 84/131 (64%), Gaps = 6/131 (4%)
 Frame = +3

Query: 12  REGLKLDELGWXXXXXXXXXXXXXXXXXXXXXVDTAFVGHIGSVELAAVGVSASVFNLVS 191
           R+G+K+DE+G                      VDTA+VGHIGSVELAAVGVS S+FNLVS
Sbjct: 106 RDGVKIDEVGVEILSIALPAALALAADPIASLVDTAYVGHIGSVELAAVGVSISIFNLVS 165

Query: 192 KLFNVPLLNVTTAFVAEEQASITKDN------LEDKKFLPXXXXXXXXXXTIGIAEALAL 353
           KLFNVPLLN+TT+FVAEEQA I+K N       E K+ LP           +G+AE +AL
Sbjct: 166 KLFNVPLLNITTSFVAEEQALISKSNDDSVKDQEGKRVLPSVSTSLALAAAVGVAETVAL 225

Query: 354 SVGAGFLMNAM 386
           SVG+GFLMN M
Sbjct: 226 SVGSGFLMNIM 236


>emb|CBI18108.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  119 bits (297), Expect = 3e-25
 Identities = 72/138 (52%), Positives = 80/138 (57%), Gaps = 13/138 (9%)
 Frame = +3

Query: 12  REGLKLDELGWXXXXXXXXXXXXXXXXXXXXXVDTAFVGHIGSVELAAVGVSASVFNLVS 191
           R+G   DELG                      VDTAFVGH+GSVELAAVGVS SVFNLVS
Sbjct: 93  RDGFGADELGLEILSIALPAALALAADPIASLVDTAFVGHLGSVELAAVGVSVSVFNLVS 152

Query: 192 KLFNVPLLNVTTAFVAEEQASITKDNLED-------------KKFLPXXXXXXXXXXTIG 332
           KLFNVPLLN+TT+FVAEEQA ++K   E              K  LP           IG
Sbjct: 153 KLFNVPLLNITTSFVAEEQALVSKSENESIQIGQDHVNGHKRKMLLPSVSTSLALAAGIG 212

Query: 333 IAEALALSVGAGFLMNAM 386
           IAEA+ALSVG+GFLMN M
Sbjct: 213 IAEAVALSVGSGFLMNIM 230


>ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chloroplastic [Vitis
           vinifera]
          Length = 561

 Score =  117 bits (294), Expect = 7e-25
 Identities = 72/141 (51%), Positives = 80/141 (56%), Gaps = 16/141 (11%)
 Frame = +3

Query: 12  REGLKLDELGWXXXXXXXXXXXXXXXXXXXXXVDTAFVGHIGSVELAAVGVSASVFNLVS 191
           R+G   DELG                      VDTAFVGH+GSVELAAVGVS SVFNLVS
Sbjct: 93  RDGFGADELGLEILSIALPAALALAADPIASLVDTAFVGHLGSVELAAVGVSVSVFNLVS 152

Query: 192 KLFNVPLLNVTTAFVAEEQASITKDNLED----------------KKFLPXXXXXXXXXX 323
           KLFNVPLLN+TT+FVAEEQA ++K   E                 K  LP          
Sbjct: 153 KLFNVPLLNITTSFVAEEQALVSKSENESIQIGQGTFYHVNGHKRKMLLPSVSTSLALAA 212

Query: 324 TIGIAEALALSVGAGFLMNAM 386
            IGIAEA+ALSVG+GFLMN M
Sbjct: 213 GIGIAEAVALSVGSGFLMNIM 233


>ref|XP_002879741.1| mate efflux family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325580|gb|EFH56000.1| mate efflux family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 543

 Score =  115 bits (288), Expect = 4e-24
 Identities = 64/97 (65%), Positives = 72/97 (74%), Gaps = 4/97 (4%)
 Frame = +3

Query: 108 VDTAFVGHIGSVELAAVGVSASVFNLVSKLFNVPLLNVTTAFVAEEQASITKDNLE---- 275
           VDTAFVGHIGS ELAAVGVS SVFNLVSKLFNVPLLNVTT+FVAEEQA   KD+ +    
Sbjct: 105 VDTAFVGHIGSAELAAVGVSVSVFNLVSKLFNVPLLNVTTSFVAEEQAIAAKDDSDSIET 164

Query: 276 DKKFLPXXXXXXXXXXTIGIAEALALSVGAGFLMNAM 386
            KK LP           +GIAEA+ALS+G+ FLM+ M
Sbjct: 165 SKKVLPSVSTSLVLAAGVGIAEAIALSLGSDFLMDVM 201


>ref|NP_181367.2| MATE efflux family protein [Arabidopsis thaliana]
           gi|75146798|sp|Q84K71.1|MATE2_ARATH RecName: Full=MATE
           efflux family protein 2, chloroplastic; AltName:
           Full=Protein DTX44; Flags: Precursor
           gi|28393220|gb|AAO42040.1| unknown protein [Arabidopsis
           thaliana] gi|28973233|gb|AAO63941.1| unknown protein
           [Arabidopsis thaliana] gi|330254430|gb|AEC09524.1| MATE
           efflux family protein [Arabidopsis thaliana]
          Length = 521

 Score =  115 bits (287), Expect = 5e-24
 Identities = 64/97 (65%), Positives = 72/97 (74%), Gaps = 4/97 (4%)
 Frame = +3

Query: 108 VDTAFVGHIGSVELAAVGVSASVFNLVSKLFNVPLLNVTTAFVAEEQASITKDNLE---- 275
           VDTAFVGHIGS ELAAVGVS SVFNLVSKLFNVPLLNVTT+FVAEEQA   KD+ +    
Sbjct: 100 VDTAFVGHIGSAELAAVGVSVSVFNLVSKLFNVPLLNVTTSFVAEEQAIAAKDDNDSIET 159

Query: 276 DKKFLPXXXXXXXXXXTIGIAEALALSVGAGFLMNAM 386
            KK LP           +GIAEA+ALS+G+ FLM+ M
Sbjct: 160 SKKVLPSVSTSLVLAAGVGIAEAIALSLGSDFLMDVM 196


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