BLASTX nr result

ID: Bupleurum21_contig00027750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027750
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553133.1| PREDICTED: oxygen-evolving enhancer protein ...   162   3e-38
ref|NP_001239652.1| uncharacterized protein LOC100784902 [Glycin...   160   1e-37
gb|ACU19056.1| unknown [Glycine max]                                  159   4e-37
emb|CAN78534.1| hypothetical protein VITISV_006311 [Vitis vinifera]   150   1e-34
ref|XP_002283897.1| PREDICTED: oxygen-evolving enhancer protein ...   149   2e-34

>ref|XP_003553133.1| PREDICTED: oxygen-evolving enhancer protein 3-1, chloroplastic-like
           [Glycine max]
          Length = 186

 Score =  162 bits (410), Expect = 3e-38
 Identities = 86/165 (52%), Positives = 117/165 (70%), Gaps = 3/165 (1%)
 Frame = +3

Query: 48  KPNHSHPLISTPPFKNTIQMSFP-TRRSTLLVSLFSIVL--HSNTTTKQANAFDFSLTVP 218
           KP+  H        +N  ++S   +RR  +L ++ S++L  + N  T+ ANAF+F    P
Sbjct: 26  KPSFQH-------LQNNKELSLKISRRVGVLAAITSLILGVNGNFGTQSANAFEFKFVAP 78

Query: 219 DQTIEEAENGIKFHAQSLLQVKETLDLESWKEAQKDLRQSSALLKQDIYTIIQSKPPTQR 398
           D T+E+A +G++ HAQ LL V++ L+LESW+ AQK LRQSSA+LK+DIYTIIQSKP  +R
Sbjct: 79  DMTVEDALSGVRGHAQDLLHVRDLLELESWRAAQKTLRQSSAILKKDIYTIIQSKPGIER 138

Query: 399 PQLRKLYSILFNSVSELDYAARDKDVTRVHECYDNIVAALNKIFS 533
            QLRKLYS LFN+V+ LDYAARDKD  +V +CY+NIV A+N I S
Sbjct: 139 AQLRKLYSTLFNNVTRLDYAARDKDGPQVWQCYENIVVAVNDILS 183


>ref|NP_001239652.1| uncharacterized protein LOC100784902 [Glycine max]
           gi|255638735|gb|ACU19672.1| unknown [Glycine max]
          Length = 189

 Score =  160 bits (405), Expect = 1e-37
 Identities = 84/164 (51%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
 Frame = +3

Query: 48  KPNHSHPLISTPPFKNTIQMSFPTRRSTLLVSLFSIVLHSNTT--TKQANAFDFSLTVPD 221
           KP+  H  +        + +   +RR  +L ++ S++L  N    T+ ANAF+F    PD
Sbjct: 26  KPSFQH--LQNNSNNKELSLKIRSRRVGVLAAITSLILGGNGIFRTQSANAFEFKFVAPD 83

Query: 222 QTIEEAENGIKFHAQSLLQVKETLDLESWKEAQKDLRQSSALLKQDIYTIIQSKPPTQRP 401
            T+EEA +G++ HAQ LL V++ L+LESW+ AQK LRQSSA+LK+DIY IIQSKP  +R 
Sbjct: 84  MTVEEALSGVRGHAQDLLHVRDLLELESWRAAQKTLRQSSAILKKDIYIIIQSKPGIERA 143

Query: 402 QLRKLYSILFNSVSELDYAARDKDVTRVHECYDNIVAALNKIFS 533
           QLRKLYS LFN+V+ LDYAARDKD  +V +CY NIV A+N I S
Sbjct: 144 QLRKLYSTLFNNVTRLDYAARDKDGPQVWQCYKNIVVAVNDILS 187


>gb|ACU19056.1| unknown [Glycine max]
          Length = 186

 Score =  159 bits (401), Expect = 4e-37
 Identities = 84/165 (50%), Positives = 116/165 (70%), Gaps = 3/165 (1%)
 Frame = +3

Query: 48  KPNHSHPLISTPPFKNTIQMSFP-TRRSTLLVSLFSIVL--HSNTTTKQANAFDFSLTVP 218
           KP+  H        +N  ++S   +RR  +L ++ S++L  + N  T+ ANAF+F    P
Sbjct: 26  KPSFQH-------LQNNKELSLKISRRVGVLAAITSLILGVNGNFGTQSANAFEFKFVAP 78

Query: 219 DQTIEEAENGIKFHAQSLLQVKETLDLESWKEAQKDLRQSSALLKQDIYTIIQSKPPTQR 398
           D T+E+A +G++ HAQ LL V++ L+LESW+ AQK LRQSSA+LK+DIYTIIQSKP  +R
Sbjct: 79  DMTVEDALSGVRGHAQDLLHVRDLLELESWRAAQKTLRQSSAILKKDIYTIIQSKPGIER 138

Query: 399 PQLRKLYSILFNSVSELDYAARDKDVTRVHECYDNIVAALNKIFS 533
            QLRKLYS  F++V+ LDYAARDKD  +V +CY+NIV A+N I S
Sbjct: 139 AQLRKLYSTFFDNVTRLDYAARDKDGPQVWQCYENIVVAVNDILS 183


>emb|CAN78534.1| hypothetical protein VITISV_006311 [Vitis vinifera]
          Length = 184

 Score =  150 bits (379), Expect = 1e-34
 Identities = 83/169 (49%), Positives = 108/169 (63%), Gaps = 2/169 (1%)
 Frame = +3

Query: 33  FSNPTKPNHSHPLISTPPFKNTIQMSFPTRRSTLLVSLFSIVLHSNT--TTKQANAFDFS 206
           + +PT   H  P          +  S  TRR   + ++  ++L        K AN FDF 
Sbjct: 14  YLSPTIICHLKPSFLLRENPEKVPKSNFTRRIGAIATMAKVLLAREAIFNVKIANGFDFK 73

Query: 207 LTVPDQTIEEAENGIKFHAQSLLQVKETLDLESWKEAQKDLRQSSALLKQDIYTIIQSKP 386
           +  P QT+EEAE+GI+ HA +LLQVK  ++ E+WK+ QK LR+SS+LLKQDIYTIIQSKP
Sbjct: 74  MVAPGQTLEEAESGIRGHALALLQVKALIESEAWKDMQKALRKSSSLLKQDIYTIIQSKP 133

Query: 387 PTQRPQLRKLYSILFNSVSELDYAARDKDVTRVHECYDNIVAALNKIFS 533
            + RPQLRKLYS LFN+V+ LDYAARD D T+V E Y+ I   L+ I S
Sbjct: 134 GSMRPQLRKLYSNLFNNVTRLDYAARDNDATQVWEYYEKIAITLDDILS 182


>ref|XP_002283897.1| PREDICTED: oxygen-evolving enhancer protein 3-1, chloroplastic-like
           [Vitis vinifera]
          Length = 184

 Score =  149 bits (377), Expect = 2e-34
 Identities = 78/141 (55%), Positives = 100/141 (70%), Gaps = 2/141 (1%)
 Frame = +3

Query: 117 TRRSTLLVSLFSIVLHSNT--TTKQANAFDFSLTVPDQTIEEAENGIKFHAQSLLQVKET 290
           TRR   + ++  ++L        K AN FDF +  P QT+EEAE+GI+ HA +LLQVK  
Sbjct: 42  TRRIGAIATMAKVLLAREAIFNVKIANGFDFKMVAPGQTLEEAESGIRGHALALLQVKAL 101

Query: 291 LDLESWKEAQKDLRQSSALLKQDIYTIIQSKPPTQRPQLRKLYSILFNSVSELDYAARDK 470
           ++ E+WK+ QK LR+SS+LLKQDIYTIIQSKP + RPQLRKLYS LFN+V+ LDYAARD 
Sbjct: 102 IESEAWKDMQKALRKSSSLLKQDIYTIIQSKPGSMRPQLRKLYSNLFNNVTRLDYAARDN 161

Query: 471 DVTRVHECYDNIVAALNKIFS 533
           D T+V E Y+ I   L+ I S
Sbjct: 162 DATQVWEYYEKIAITLDDILS 182


Top