BLASTX nr result

ID: Bupleurum21_contig00027746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027746
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB45842.1| hypothetical protein [Eutrema halophilum]               82   2e-25
emb|CBI17425.3| unnamed protein product [Vitis vinifera]               84   2e-24
gb|ADA60971.1| stylish [Brassica rapa subsp. pekinensis]               78   3e-24
ref|XP_004167428.1| PREDICTED: uncharacterized LOC101216097 [Cuc...    78   1e-23
ref|NP_190675.4| Lateral root primordium (LRP) protein-like prot...    77   2e-23

>gb|ABB45842.1| hypothetical protein [Eutrema halophilum]
          Length = 345

 Score = 82.0 bits (201), Expect(2) = 2e-25
 Identities = 39/50 (78%), Positives = 44/50 (88%)
 Frame = +3

Query: 426 NFPGEVRSPAVFSCVRVSSIDDQAGEDQYAYQTAVNIGGHLFKGILYDQG 575
           NFP EV SPAVF CVRVSS+DD  GED+YAY+TAV+I GH+FKGILYDQG
Sbjct: 227 NFPPEVSSPAVFRCVRVSSVDD--GEDEYAYKTAVSISGHVFKGILYDQG 274



 Score = 60.1 bits (144), Expect(2) = 2e-25
 Identities = 40/112 (35%), Positives = 46/112 (41%)
 Frame = +2

Query: 83  ERSGDFLMMSTSSSSNYXXXXXXXXXXXXXXXCEDCGNQAKKDXXXXXXXXXXXXXGFEC 262
           E SGD LMM  S  S                 C+DCGNQAKKD             G EC
Sbjct: 117 ETSGDALMMMRSGGSG-------------GPNCQDCGNQAKKDCAHMRCRTCCKSRGLEC 163

Query: 263 QTHVKSTWVSATKRXXXXXXXXXXXXXXXXXXXXPIDVPKRLRQNHPHNSSA 418
            THVKSTWV A KR                     + VPKR R++ P  S++
Sbjct: 164 PTHVKSTWVPAAKRRERQQQLASGQQPQG------LSVPKRQREHIPARSTS 209


>emb|CBI17425.3| unnamed protein product [Vitis vinifera]
          Length = 317

 Score = 84.0 bits (206), Expect(2) = 2e-24
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = +3

Query: 420 LVNFPGEVRSPAVFSCVRVSSIDDQAGEDQYAYQTAVNIGGHLFKGILYDQG 575
           + NFP EV SPAVF CVRVSSID+   +DQYAYQTAVNIGGH+FKGILYD G
Sbjct: 171 IANFPSEVNSPAVFRCVRVSSIDET--DDQYAYQTAVNIGGHVFKGILYDHG 220



 Score = 54.7 bits (130), Expect(2) = 2e-24
 Identities = 23/42 (54%), Positives = 26/42 (61%)
 Frame = +2

Query: 179 CEDCGNQAKKDXXXXXXXXXXXXXGFECQTHVKSTWVSATKR 304
           C+DCGNQAKKD             GF+C TH+KSTWV A KR
Sbjct: 90  CQDCGNQAKKDCIHMRCRTCCKSRGFQCPTHIKSTWVPAAKR 131


>gb|ADA60971.1| stylish [Brassica rapa subsp. pekinensis]
          Length = 363

 Score = 78.2 bits (191), Expect(2) = 3e-24
 Identities = 36/50 (72%), Positives = 44/50 (88%)
 Frame = +3

Query: 426 NFPGEVRSPAVFSCVRVSSIDDQAGEDQYAYQTAVNIGGHLFKGILYDQG 575
           +FP EV SPAVF CVRVSS++D  GE+++AYQTAV+IGGH+FKGILYD G
Sbjct: 236 DFPAEVSSPAVFRCVRVSSVED--GEEEFAYQTAVSIGGHVFKGILYDNG 283



 Score = 59.7 bits (143), Expect(2) = 3e-24
 Identities = 33/80 (41%), Positives = 38/80 (47%)
 Frame = +2

Query: 179 CEDCGNQAKKDXXXXXXXXXXXXXGFECQTHVKSTWVSATKRXXXXXXXXXXXXXXXXXX 358
           C+DCGNQAKKD             GF+C THV+STWV A KR                  
Sbjct: 139 CQDCGNQAKKDCAHVRCRTCCKSRGFQCPTHVRSTWVPAAKRRERQQQLGTVQPQTHLPR 198

Query: 359 XXPIDVPKRLRQNHPHNSSA 418
                VPKRLR+N P  SS+
Sbjct: 199 GDS-GVPKRLRENLPATSSS 217


>ref|XP_004167428.1| PREDICTED: uncharacterized LOC101216097 [Cucumis sativus]
          Length = 263

 Score = 78.2 bits (191), Expect(2) = 1e-23
 Identities = 36/50 (72%), Positives = 43/50 (86%)
 Frame = +3

Query: 426 NFPGEVRSPAVFSCVRVSSIDDQAGEDQYAYQTAVNIGGHLFKGILYDQG 575
           NFP EV +PAVF CVR++S+D+   +DQYAYQTAVNIGGH+FKGILYD G
Sbjct: 174 NFPTEVTTPAVFRCVRMTSLDET--DDQYAYQTAVNIGGHIFKGILYDHG 221



 Score = 57.8 bits (138), Expect(2) = 1e-23
 Identities = 25/42 (59%), Positives = 28/42 (66%)
 Frame = +2

Query: 179 CEDCGNQAKKDXXXXXXXXXXXXXGFECQTHVKSTWVSATKR 304
           C+DCGNQAKKD             GFEC+THVKSTWV A+KR
Sbjct: 102 CQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKR 143


>ref|NP_190675.4| Lateral root primordium (LRP) protein-like protein [Arabidopsis
           thaliana] gi|332645224|gb|AEE78745.1| Lateral root
           primordium (LRP) protein-like protein [Arabidopsis
           thaliana]
          Length = 370

 Score = 76.6 bits (187), Expect(2) = 2e-23
 Identities = 36/50 (72%), Positives = 43/50 (86%)
 Frame = +3

Query: 426 NFPGEVRSPAVFSCVRVSSIDDQAGEDQYAYQTAVNIGGHLFKGILYDQG 575
           NFP EV S AVF CVRVSS++D  GE+++AYQTAV+IGGH+FKGILYD G
Sbjct: 237 NFPAEVSSSAVFRCVRVSSVED--GEEEFAYQTAVSIGGHIFKGILYDLG 284



 Score = 58.9 bits (141), Expect(2) = 2e-23
 Identities = 33/80 (41%), Positives = 37/80 (46%)
 Frame = +2

Query: 179 CEDCGNQAKKDXXXXXXXXXXXXXGFECQTHVKSTWVSATKRXXXXXXXXXXXXXXXXXX 358
           C+DCGNQAKKD             GFEC THV+STWV A KR                  
Sbjct: 144 CQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQPQTQLPR 203

Query: 359 XXPIDVPKRLRQNHPHNSSA 418
                VPKR R+N P  SS+
Sbjct: 204 GE--SVPKRHRENLPATSSS 221


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