BLASTX nr result

ID: Bupleurum21_contig00027731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027731
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523320.1| nucleotide binding protein, putative [Ricinu...    71   8e-11
ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255...    70   2e-10
ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
emb|CBI40569.3| unnamed protein product [Vitis vinifera]               55   4e-06

>ref|XP_002523320.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223537408|gb|EEF39036.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 2299

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/106 (33%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
 Frame = -1

Query: 334  RSMLKLFPGSSADDFIRKTYTMIGLCEYYVYFSSALIQRNLRALNLIVKPLLVTCKSDHV 155
            R+ ++   G S++D   ++  ++ L E+YV+F+SA +QRN + L L+V+PLL+TC + H 
Sbjct: 1699 RTAVRSVSGLSSEDVTARSLVLLDLFEFYVHFASAWLQRNSKGLLLMVQPLLITCTNGHT 1758

Query: 154  HYEFNLEDLNKLLPEIAELL-----THDTIIDEVLDSAPPVPPDHD 32
             YE ++ +L  +L  IAELL      +DT +  ++ +  P   D +
Sbjct: 1759 PYEVDITNLKNILYHIAELLGSNLSVNDTGVGHIVANCMPSTQDRE 1804


>ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255258 [Vitis vinifera]
          Length = 2572

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/89 (39%), Positives = 55/89 (61%)
 Frame = -1

Query: 334  RSMLKLFPGSSADDFIRKTYTMIGLCEYYVYFSSALIQRNLRALNLIVKPLLVTCKSDHV 155
            R++LK+F  S  DD I+K   ++ L EY +YF  A  QRNL  L L+ +PLL+T    H 
Sbjct: 1752 RAILKIFSVSCTDDVIKKPIILLDLIEYCLYFVCAWFQRNLNGLILMARPLLITYTDGHA 1811

Query: 154  HYEFNLEDLNKLLPEIAELLTHDTIIDEV 68
                ++E+L K L +I+E +  +++ID+V
Sbjct: 1812 SCNIDMENLKKALHQISESVDLNSLIDDV 1840


>ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|222844366|gb|EEE81913.1|
            predicted protein [Populus trichocarpa]
          Length = 2434

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/79 (40%), Positives = 54/79 (68%)
 Frame = -1

Query: 334  RSMLKLFPGSSADDFIRKTYTMIGLCEYYVYFSSALIQRNLRALNLIVKPLLVTCKSDHV 155
            R+ +++F  SS++D + ++  ++ L EYY+YF+SA +QR  + L L+V+PLL+T  S H 
Sbjct: 1664 RAAMRIF--SSSED-VSRSLVILDLFEYYIYFASAWLQRKSKGLLLMVQPLLITLTSGHT 1720

Query: 154  HYEFNLEDLNKLLPEIAEL 98
             YE ++ +L  +L  IAEL
Sbjct: 1721 PYEVDIGNLKSILHHIAEL 1739


>emb|CBI40569.3| unnamed protein product [Vitis vinifera]
          Length = 2065

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/79 (36%), Positives = 45/79 (56%)
 Frame = -1

Query: 304  SADDFIRKTYTMIGLCEYYVYFSSALIQRNLRALNLIVKPLLVTCKSDHVHYEFNLEDLN 125
            S D    K   ++ L EY +YF  A  QRNL  L L+ +PLL+T    H     ++E+L 
Sbjct: 1327 SQDRIDTKPIILLDLIEYCLYFVCAWFQRNLNGLILMARPLLITYTDGHASCNIDMENLK 1386

Query: 124  KLLPEIAELLTHDTIIDEV 68
            K L +I+E +  +++ID+V
Sbjct: 1387 KALHQISESVDLNSLIDDV 1405


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