BLASTX nr result

ID: Bupleurum21_contig00027707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027707
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   187   9e-46
ref|XP_002317615.1| predicted protein [Populus trichocarpa] gi|2...   185   6e-45
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   179   3e-43
dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   177   2e-42
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]   176   3e-42

>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  187 bits (476), Expect = 9e-46
 Identities = 93/197 (47%), Positives = 127/197 (64%)
 Frame = -3

Query: 591 DHPGLILISKKLTGTENYGPWKRSLSIALSAKNKLGIVNGTIPRPDESSPVRSQWDRVND 412
           DHPG++L+S  LTG  NY  W R++ +AL+AKNK+  ++G+IP P+    +   W R N 
Sbjct: 34  DHPGIVLVSHHLTGA-NYNTWSRAMVMALTAKNKISFIDGSIPCPESDDLLFGTWIRCNS 92

Query: 411 MVISWILNTVSDEISNGMDFVNTAQEVWNELSDQFSTINGHRVYQVLKDLHTLEQGDKSV 232
           MVISWILN+V  +I++ + + +TA  +WN+L D+F   NG R++Q+ K L  L QG   V
Sbjct: 93  MVISWILNSVHKDIADSLLYFDTAVGIWNDLRDRFCQSNGPRIFQIKKHLIALSQGSLDV 152

Query: 231 EFYYHRMKNLWDEYSALEPLIPCKPGCVCETHKLQEAREQRKKLLQFLMGLNESFSSARG 52
             YY R+K LWDE    +PL    P C C T K     +Q++ ++QFLMGLNESF   R 
Sbjct: 153 STYYTRLKILWDELKGFQPL----PECACGTMKTWMEFQQQEYVMQFLMGLNESFVQTRS 208

Query: 51  QILMMSPLPTIAQAFSL 1
           QILMM PLP IA+ FSL
Sbjct: 209 QILMMEPLPPIAKVFSL 225


>ref|XP_002317615.1| predicted protein [Populus trichocarpa] gi|222860680|gb|EEE98227.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  185 bits (469), Expect = 6e-45
 Identities = 93/198 (46%), Positives = 131/198 (66%), Gaps = 1/198 (0%)
 Frame = -3

Query: 591 DHPGLILISKKLTGTENYGPWKRSLSIALSAKNKLGIVNGTIPRP-DESSPVRSQWDRVN 415
           DH  L+L+++ LT TENY  W RS+  AL A+NKLG ++G I RP +E  P+   W+R N
Sbjct: 38  DHTSLVLVTELLT-TENYITWSRSMRRALRARNKLGFISGNIVRPTNEEDPLFEMWERCN 96

Query: 414 DMVISWILNTVSDEISNGMDFVNTAQEVWNELSDQFSTINGHRVYQVLKDLHTLEQGDKS 235
           DMV+SWI N VS +I + + FV+ AQ VW EL+D+F+  NGHR++Q+ +DL TL Q   S
Sbjct: 97  DMVVSWIQNAVSTDIKHTLVFVDDAQMVWTELNDRFTQQNGHRIFQLRRDLATLRQDKDS 156

Query: 234 VEFYYHRMKNLWDEYSALEPLIPCKPGCVCETHKLQEAREQRKKLLQFLMGLNESFSSAR 55
           V  Y+  +K LWDE     P+    P C C   K+   R QR  ++QFLMGLN+ +++AR
Sbjct: 157 VSSYFGNLKTLWDEMIVYNPM----PLCTCGQLKVLNERYQRDYVIQFLMGLNDQYTNAR 212

Query: 54  GQILMMSPLPTIAQAFSL 1
            QI+++ PLP+I + FSL
Sbjct: 213 DQIMLIEPLPSINKVFSL 230


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  179 bits (454), Expect = 3e-43
 Identities = 90/198 (45%), Positives = 130/198 (65%), Gaps = 2/198 (1%)
 Frame = -3

Query: 591 DHPGLILISKKLTGTENYGPWKRSLSIALSAKNKLGIVNGTIPRPDESSPVR--SQWDRV 418
           DHPGL+LISK L G +NY  WKR++ +AL++KNKLG VNG+I  P E       + W R 
Sbjct: 25  DHPGLVLISKSLNG-DNYSAWKRAMILALNSKNKLGFVNGSIKAPSEEIDPEGYATWSRC 83

Query: 417 NDMVISWILNTVSDEISNGMDFVNTAQEVWNELSDQFSTINGHRVYQVLKDLHTLEQGDK 238
           NDMV SWI+NT++ EI+N + + +TA EVW +L ++FS  N  R++++ +D+  L Q   
Sbjct: 84  NDMVHSWIVNTLNPEIANSVIYYSTAHEVWEDLCERFSQSNAPRIFEIQRDIACLRQEQL 143

Query: 237 SVEFYYHRMKNLWDEYSALEPLIPCKPGCVCETHKLQEAREQRKKLLQFLMGLNESFSSA 58
           SV  YY ++K LWDE ++                    A++ ++KL+QFLMGLNES+S  
Sbjct: 144 SVSAYYTKLKGLWDELASYNA-------------AAHGAQQDQQKLMQFLMGLNESYSVI 190

Query: 57  RGQILMMSPLPTIAQAFS 4
           RGQIL+M+PLP++ QA+S
Sbjct: 191 RGQILLMNPLPSVRQAYS 208


>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  177 bits (448), Expect = 2e-42
 Identities = 81/197 (41%), Positives = 128/197 (64%)
 Frame = -3

Query: 591 DHPGLILISKKLTGTENYGPWKRSLSIALSAKNKLGIVNGTIPRPDESSPVRSQWDRVND 412
           D PG+ LI+    G+ +YG WKR + I+LSAKNKLG + G   +PD+   +  QW R +D
Sbjct: 43  DAPGMNLINTSFDGS-SYGNWKRGVLISLSAKNKLGFITGAYKKPDKEDLLFEQWRRCSD 101

Query: 411 MVISWILNTVSDEISNGMDFVNTAQEVWNELSDQFSTINGHRVYQVLKDLHTLEQGDKSV 232
           MV++W+LN++S EI+  + +  TAQE+W EL  ++  I+G +++Q+ ++L+ + QG   V
Sbjct: 102 MVLAWLLNSLSKEIAESVLYSQTAQELWQELEQRYGQIDGTKMFQLQRELNNVSQGTNDV 161

Query: 231 EFYYHRMKNLWDEYSALEPLIPCKPGCVCETHKLQEAREQRKKLLQFLMGLNESFSSARG 52
             Y++++K +WD+   L   + C   C CE        ++ ++L+QFLMGLNE +S  RG
Sbjct: 162 AAYFNKLKRIWDQMKVLNTFMVCSCECNCEAKGHNAKMQEDQQLIQFLMGLNEVYSGIRG 221

Query: 51  QILMMSPLPTIAQAFSL 1
            ILMM PLP+ AQA+S+
Sbjct: 222 NILMMKPLPSTAQAYSI 238


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score =  176 bits (445), Expect = 3e-42
 Identities = 85/198 (42%), Positives = 132/198 (66%), Gaps = 2/198 (1%)
 Frame = -3

Query: 591 DHPGLILISKKLTGTENYGPWKRSLSIALSAKNKLGIVNGT--IPRPDESSPVRSQWDRV 418
           DHPG++L+SK L G +NY  W R+++I+L+AK+KLG ++GT  +P   +     + W + 
Sbjct: 24  DHPGMVLVSKPLNG-DNYSTWCRAMTISLNAKSKLGFIDGTTTMPSATDKPBEHASWKKC 82

Query: 417 NDMVISWILNTVSDEISNGMDFVNTAQEVWNELSDQFSTINGHRVYQVLKDLHTLEQGDK 238
           NDM++SWILN++S ++++ + F  TAQEVW +L D FS  N  R++Q+ +D+  L Q   
Sbjct: 83  NDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDHFSQSNAPRIFQIERDIACLTQDQM 142

Query: 237 SVEFYYHRMKNLWDEYSALEPLIPCKPGCVCETHKLQEAREQRKKLLQFLMGLNESFSSA 58
           +V  YY R+K LWDE  +    +     C C       A  +R++L+QFLMGLNES+++ 
Sbjct: 143 TVXAYYTRLKKLWDELGSYNDTV-----CSC------GADHKRRRLMQFLMGLNESYNAI 191

Query: 57  RGQILMMSPLPTIAQAFS 4
           RGQIL+M+PLP +A+A+S
Sbjct: 192 RGQILLMNPLPDVAKAYS 209


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