BLASTX nr result

ID: Bupleurum21_contig00027699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027699
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316711.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
emb|CAA99112.1| hypothetical protein [Brassica oleracea var. alb...    70   2e-12
gb|AAO42861.1| At1g30130 [Arabidopsis thaliana] gi|110743324|dbj...    74   9e-12
ref|NP_564348.1| uncharacterized protein [Arabidopsis thaliana] ...    74   9e-12
gb|AAM67088.1| unknown [Arabidopsis thaliana]                          73   2e-11

>ref|XP_002316711.1| predicted protein [Populus trichocarpa] gi|222859776|gb|EEE97323.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/49 (79%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
 Frame = +1

Query: 136 SVVSIYQGTVWHERRRPVHHSFKYSVRYALFHLDH-HSPSDHFSADQAR 279
           + VS+YQGTVWHERRRPVHHSF YSVRYALF LDH H+P DH SAD+AR
Sbjct: 41  NAVSLYQGTVWHERRRPVHHSFLYSVRYALFDLDHAHAPPDHLSADEAR 89


>emb|CAA99112.1| hypothetical protein [Brassica oleracea var. alboglabra]
          Length = 283

 Score = 70.5 bits (171), Expect(2) = 2e-12
 Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
 Frame = +1

Query: 136 SVVSIYQGTVWHERRRPVHHSFKYSVRYALFHLDH--HSPSDHFSADQAR 279
           S VS Y+GTVWH+R RPV HSF+Y+VRYALF LD    +P DH SAD+AR
Sbjct: 60  SNVSYYEGTVWHDRLRPVRHSFRYTVRYALFDLDKSLETPPDHLSADEAR 109



 Score = 26.2 bits (56), Expect(2) = 2e-12
 Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +3

Query: 12  DNGVTLSTLL--YHFRHIHLPLFFNPTPLP 95
           D G  LS LL   HF H  LPL  +P PLP
Sbjct: 18  DYGTALSPLLNRLHFNHNALPL--SPAPLP 45


>gb|AAO42861.1| At1g30130 [Arabidopsis thaliana] gi|110743324|dbj|BAE99550.1|
           hypothetical protein [Arabidopsis thaliana]
          Length = 311

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/48 (70%), Positives = 40/48 (83%), Gaps = 2/48 (4%)
 Frame = +1

Query: 142 VSIYQGTVWHERRRPVHHSFKYSVRYALFHLDH--HSPSDHFSADQAR 279
           VS Y+GTVWH+R RPV HSF+YSVRYALF LD   ++P DHFSAD+AR
Sbjct: 44  VSFYEGTVWHDRLRPVRHSFRYSVRYALFDLDKAINTPPDHFSADEAR 91


>ref|NP_564348.1| uncharacterized protein [Arabidopsis thaliana]
           gi|42571697|ref|NP_973939.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|12321635|gb|AAG50861.1|AC074176_10 unknown protein
           [Arabidopsis thaliana] gi|222423586|dbj|BAH19762.1|
           AT1G30130 [Arabidopsis thaliana]
           gi|332193061|gb|AEE31182.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332193062|gb|AEE31183.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 311

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/48 (70%), Positives = 40/48 (83%), Gaps = 2/48 (4%)
 Frame = +1

Query: 142 VSIYQGTVWHERRRPVHHSFKYSVRYALFHLDH--HSPSDHFSADQAR 279
           VS Y+GTVWH+R RPV HSF+YSVRYALF LD   ++P DHFSAD+AR
Sbjct: 44  VSFYEGTVWHDRLRPVRHSFRYSVRYALFDLDKAINTPPDHFSADEAR 91


>gb|AAM67088.1| unknown [Arabidopsis thaliana]
          Length = 311

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
 Frame = +1

Query: 142 VSIYQGTVWHERRRPVHHSFKYSVRYALFHLDH--HSPSDHFSADQAR 279
           VS Y+GTVWH+R RPV HSF+YSVRYALF LD    +P DHFSAD+AR
Sbjct: 44  VSFYEGTVWHDRLRPVRHSFRYSVRYALFDLDKAITTPPDHFSADEAR 91


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