BLASTX nr result

ID: Bupleurum21_contig00027698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027698
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278714.2| PREDICTED: GC-rich sequence DNA-binding fact...   363   4e-98
ref|XP_004159322.1| PREDICTED: GC-rich sequence DNA-binding fact...   350   4e-94
ref|XP_004135116.1| PREDICTED: GC-rich sequence DNA-binding fact...   349   6e-94
ref|NP_196472.1| GC-rich sequence DNA-binding factor [Arabidopsi...   333   6e-89
ref|XP_002873370.1| increased level of polyploidy1-1D [Arabidops...   325   1e-86

>ref|XP_002278714.2| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Vitis
            vinifera]
          Length = 913

 Score =  363 bits (932), Expect = 4e-98
 Identities = 205/370 (55%), Positives = 242/370 (65%), Gaps = 3/370 (0%)
 Frame = -2

Query: 1101 QFRKGLGKRTDDGASRVVNSTVPTVP--QQNVTYQAAPTPYHSVSN-AXXXXXXXXXXXX 931
            QFRKGLGKR DDG+SRVV+S+VP V   QQ     ++ T Y SV   +            
Sbjct: 291  QFRKGLGKRMDDGSSRVVSSSVPVVQKVQQQKFMYSSVTAYTSVPGVSAPLNIGGAVGPL 350

Query: 930  XXLDVMSISQQAELSTKALHENVRRLKETHDRTVKSINRTDENLSVSLLKVTALESSLSA 751
               D MS+SQQAEL+ KALHEN+RRLKE+H RT+ S+ RTDENLS SL  +T LE SL+A
Sbjct: 351  PGFDAMSLSQQAELAKKALHENLRRLKESHGRTMSSLTRTDENLSSSLSNITTLEKSLTA 410

Query: 750  AGEKFIFMQKLRDFVSVICDFLQDKAPYIEELEFQMQKLHXXXXXXXXXXXXADSNDEMV 571
            AGEKFIFMQ LRDFVSVICDFLQ KAP+IEELE QMQKLH            AD NDEM+
Sbjct: 411  AGEKFIFMQXLRDFVSVICDFLQHKAPFIEELEEQMQKLHEERASAILERRAAD-NDEMM 469

Query: 570  EIEVAADAAMSVLSKGGNXXXXXXXXXXXXXXXXXXSKESRNLPVKLDEFGRDENLQKXX 391
            EI+ + DAAMSV +K G+                   +E  NLPVKLDE+GRD NLQK  
Sbjct: 470  EIQASVDAAMSVFTKSGSNEAMVAAARTAAQAASAAMREQTNLPVKLDEYGRDINLQKCM 529

Query: 390  XXXXXXXXXXXXXXXXXXXRLSSMDHDSPNQPIEGXXXXXXXXXXXTAYQSNREQLLQIA 211
                               R++ ++++S +Q IEG           TAYQSNR+ LLQ A
Sbjct: 530  DKNRRSEARQRKRDRWDAKRMTFLENESSHQKIEGESSTDESDSETTAYQSNRDLLLQTA 589

Query: 210  EQVFSDASEEYSQLSVVKERFERWKRDYPSSYNDAYMSLSIPAIFSPYVRLELLKWDPLH 31
            EQ+F DA+EEYSQLS VKER ERWK+ Y SSY DAYMSLS+PAIFSPYVRLELLKWDPL+
Sbjct: 590  EQIFGDAAEEYSQLSAVKERIERWKKQYSSSYRDAYMSLSVPAIFSPYVRLELLKWDPLY 649

Query: 30   EDSDFIDTKW 1
            E++DF D KW
Sbjct: 650  EEADFDDMKW 659


>ref|XP_004159322.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Cucumis
            sativus]
          Length = 889

 Score =  350 bits (898), Expect = 4e-94
 Identities = 202/371 (54%), Positives = 242/371 (65%), Gaps = 4/371 (1%)
 Frame = -2

Query: 1101 QFRKGLGKRTDDGASRVVNSTVPTVPQ---QNVTYQAAPTPYHSV-SNAXXXXXXXXXXX 934
            QFRKGLGKR DDG++RV +++VP VP    QN+ Y      Y SV S +           
Sbjct: 267  QFRKGLGKRMDDGSTRVESTSVPVVPSVQPQNLIYPTT-IGYSSVPSVSTATSIGGSVSI 325

Query: 933  XXXLDVMSISQQAELSTKALHENVRRLKETHDRTVKSINRTDENLSVSLLKVTALESSLS 754
               LD +SISQQAE++  A+ E++ RLKE++ RT  S+ +TDENLS SLLK+T LE +LS
Sbjct: 326  SQGLDGLSISQQAEIAKTAMQESMGRLKESYRRTAMSVLKTDENLSASLLKITDLEKALS 385

Query: 753  AAGEKFIFMQKLRDFVSVICDFLQDKAPYIEELEFQMQKLHXXXXXXXXXXXXADSNDEM 574
            AAG+KFIFMQKLRDFVSVICDFLQ KAP+IEELE QMQKLH            AD++DEM
Sbjct: 386  AAGDKFIFMQKLRDFVSVICDFLQHKAPFIEELEEQMQKLHEERASTVVERRVADNDDEM 445

Query: 573  VEIEVAADAAMSVLSKGGNXXXXXXXXXXXXXXXXXXSKESRNLPVKLDEFGRDENLQKX 394
            VEIE A  AA+S+L+K G+                  S+E  NLP KLDEFGRD NLQK 
Sbjct: 446  VEIETAVKAAISILNKKGSSNEMITAATSAAQAAIALSREQANLPTKLDEFGRDLNLQKR 505

Query: 393  XXXXXXXXXXXXXXXXXXXXRLSSMDHDSPNQPIEGXXXXXXXXXXXTAYQSNREQLLQI 214
                                RL+SM+ D  +Q +EG            AYQSNR+ LLQ 
Sbjct: 506  MDMKRRAEARKRRRSQYDSKRLASMEVDG-HQKVEGESSTDESDSDSAAYQSNRDLLLQT 564

Query: 213  AEQVFSDASEEYSQLSVVKERFERWKRDYPSSYNDAYMSLSIPAIFSPYVRLELLKWDPL 34
            AEQ+FSDA+EE+SQLSVVK+RFE WKRDY ++Y DAYMSLSIPAIFSPYVRLELLKWDPL
Sbjct: 565  AEQIFSDAAEEFSQLSVVKQRFEAWKRDYSATYRDAYMSLSIPAIFSPYVRLELLKWDPL 624

Query: 33   HEDSDFIDTKW 1
            HE +DF D  W
Sbjct: 625  HESADFFDMNW 635


>ref|XP_004135116.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Cucumis
            sativus]
          Length = 920

 Score =  349 bits (896), Expect = 6e-94
 Identities = 201/371 (54%), Positives = 242/371 (65%), Gaps = 4/371 (1%)
 Frame = -2

Query: 1101 QFRKGLGKRTDDGASRVVNSTVPTVPQ---QNVTYQAAPTPYHSV-SNAXXXXXXXXXXX 934
            QFRKGLGKR DDG++RV +++VP VP    QN+ Y      Y SV S +           
Sbjct: 298  QFRKGLGKRMDDGSTRVESTSVPVVPSVQPQNLIYPTT-IGYSSVPSMSTATSIGGSVSI 356

Query: 933  XXXLDVMSISQQAELSTKALHENVRRLKETHDRTVKSINRTDENLSVSLLKVTALESSLS 754
               LD +SISQQAE++  A+ E++ RLKE++ RT  S+ +TDENLS SLLK+T LE +LS
Sbjct: 357  SQGLDGLSISQQAEIAKTAMQESMGRLKESYRRTAMSVLKTDENLSASLLKITDLEKALS 416

Query: 753  AAGEKFIFMQKLRDFVSVICDFLQDKAPYIEELEFQMQKLHXXXXXXXXXXXXADSNDEM 574
            AAG+KF+FMQKLRDFVSVICDFLQ KAP+IEELE QMQKLH            AD++DEM
Sbjct: 417  AAGDKFMFMQKLRDFVSVICDFLQHKAPFIEELEEQMQKLHEERASTVVERRVADNDDEM 476

Query: 573  VEIEVAADAAMSVLSKGGNXXXXXXXXXXXXXXXXXXSKESRNLPVKLDEFGRDENLQKX 394
            VEIE A  AA+S+L+K G+                  S+E  NLP KLDEFGRD NLQK 
Sbjct: 477  VEIETAVKAAISILNKKGSSNEMVTAATSAAQAAIALSREQANLPTKLDEFGRDLNLQKR 536

Query: 393  XXXXXXXXXXXXXXXXXXXXRLSSMDHDSPNQPIEGXXXXXXXXXXXTAYQSNREQLLQI 214
                                RL+SM+ D  +Q +EG            AYQSNR+ LLQ 
Sbjct: 537  MDMKRRAEARKRRRSQYDSKRLASMEVDG-HQKVEGESSTDESDSDSAAYQSNRDLLLQT 595

Query: 213  AEQVFSDASEEYSQLSVVKERFERWKRDYPSSYNDAYMSLSIPAIFSPYVRLELLKWDPL 34
            AEQ+FSDA+EE+SQLSVVK+RFE WKRDY ++Y DAYMSLSIPAIFSPYVRLELLKWDPL
Sbjct: 596  AEQIFSDAAEEFSQLSVVKQRFEAWKRDYSATYRDAYMSLSIPAIFSPYVRLELLKWDPL 655

Query: 33   HEDSDFIDTKW 1
            HE +DF D  W
Sbjct: 656  HESADFFDMNW 666


>ref|NP_196472.1| GC-rich sequence DNA-binding factor [Arabidopsis thaliana]
            gi|9759349|dbj|BAB10004.1| unnamed protein product
            [Arabidopsis thaliana] gi|117413996|dbj|BAF36503.1|
            transcriptional repressor ILP1 [Arabidopsis thaliana]
            gi|332003936|gb|AED91319.1| GC-rich sequence DNA-binding
            factor [Arabidopsis thaliana]
          Length = 908

 Score =  333 bits (853), Expect = 6e-89
 Identities = 181/372 (48%), Positives = 234/372 (62%), Gaps = 5/372 (1%)
 Frame = -2

Query: 1101 QFRKGLGKRTDDGASRVVNST---VPTVPQQNVTYQAAPT--PYHSVSNAXXXXXXXXXX 937
            QF+KG+GKR D+G+ R V S    VP   +Q    Q  P    YH+ +            
Sbjct: 283  QFKKGIGKRMDEGSHRTVTSNGIGVPLHSKQQTLPQQQPQMYAYHAGTPMPNVSVAPTIG 342

Query: 936  XXXXLDVMSISQQAELSTKALHENVRRLKETHDRTVKSINRTDENLSVSLLKVTALESSL 757
                +D + +SQQAEL+ KAL +NV++LKE+H +T+ S+ +TDENL+ SL+ +TALESSL
Sbjct: 343  PATSVDTLPMSQQAELAKKALKDNVKKLKESHAKTLSSLTKTDENLTASLMSITALESSL 402

Query: 756  SAAGEKFIFMQKLRDFVSVICDFLQDKAPYIEELEFQMQKLHXXXXXXXXXXXXADSNDE 577
            SAAG+K++FMQKLRDF+SVICDF+Q+K   IEE+E QM++L+            AD+NDE
Sbjct: 403  SAAGDKYVFMQKLRDFISVICDFMQNKGSLIEEIEDQMKELNEKHALSILERRIADNNDE 462

Query: 576  MVEIEVAADAAMSVLSKGGNXXXXXXXXXXXXXXXXXXSKESRNLPVKLDEFGRDENLQK 397
            M+E+  A  AAM+VL+K G+                   ++  N PVKLDEFGRDENLQK
Sbjct: 463  MIELGAAVKAAMTVLNKHGSSSSVIAAATGAALAASTSIRQQMNQPVKLDEFGRDENLQK 522

Query: 396  XXXXXXXXXXXXXXXXXXXXXRLSSMDHDSPNQPIEGXXXXXXXXXXXTAYQSNREQLLQ 217
                                 R S+M+ D P+  IEG           +AY+  R+ LLQ
Sbjct: 523  RREVEQRAAARQKRRARFENKRASAMEVDGPSLKIEGESSTDESDTETSAYKETRDSLLQ 582

Query: 216  IAEQVFSDASEEYSQLSVVKERFERWKRDYPSSYNDAYMSLSIPAIFSPYVRLELLKWDP 37
             A++VFSDASEEYSQLS VK RFERWKRDY S+Y DAYMSL++P+IFSPYVRLELLKWDP
Sbjct: 583  CADKVFSDASEEYSQLSKVKARFERWKRDYSSTYRDAYMSLTVPSIFSPYVRLELLKWDP 642

Query: 36   LHEDSDFIDTKW 1
            LH+D DF D KW
Sbjct: 643  LHQDVDFFDMKW 654


>ref|XP_002873370.1| increased level of polyploidy1-1D [Arabidopsis lyrata subsp. lyrata]
            gi|297319207|gb|EFH49629.1| increased level of
            polyploidy1-1D [Arabidopsis lyrata subsp. lyrata]
          Length = 908

 Score =  325 bits (833), Expect = 1e-86
 Identities = 178/372 (47%), Positives = 234/372 (62%), Gaps = 5/372 (1%)
 Frame = -2

Query: 1101 QFRKGLGKRTDDGASRVVNSTVPTVP----QQNVTYQAAPT-PYHSVSNAXXXXXXXXXX 937
            QF+KG+GKR D+G+ R V S    VP    QQ++ +Q      YH+ +            
Sbjct: 283  QFKKGIGKRMDEGSHRSVTSNGIGVPLHSNQQSLPHQQPQMYTYHAGTPMPNISVAPTIG 342

Query: 936  XXXXLDVMSISQQAELSTKALHENVRRLKETHDRTVKSINRTDENLSVSLLKVTALESSL 757
                +D + +SQQA L+ KAL +NV++LKE+H +T+ S+ +TDENL+ SL+ +TALESSL
Sbjct: 343  PATSVDTLPMSQQAALAKKALQDNVKKLKESHAKTLSSLTKTDENLTASLMSITALESSL 402

Query: 756  SAAGEKFIFMQKLRDFVSVICDFLQDKAPYIEELEFQMQKLHXXXXXXXXXXXXADSNDE 577
            SAAG+K++FMQKLRDF+SVICDF+Q+K   IEE+E QM++L+            AD+NDE
Sbjct: 403  SAAGDKYVFMQKLRDFISVICDFMQNKGSLIEEIEDQMKELNEKHALSILERRIADNNDE 462

Query: 576  MVEIEVAADAAMSVLSKGGNXXXXXXXXXXXXXXXXXXSKESRNLPVKLDEFGRDENLQK 397
            M+E+  A  AAM+VL+K G+                   ++  N PVKLDEFGRDENLQK
Sbjct: 463  MIELGAAVKAAMTVLNKQGSSTSVIAAATSAALAASASIRQQMNQPVKLDEFGRDENLQK 522

Query: 396  XXXXXXXXXXXXXXXXXXXXXRLSSMDHDSPNQPIEGXXXXXXXXXXXTAYQSNREQLLQ 217
                                 R S+M+ +  +  IEG           +AY+  R+ LLQ
Sbjct: 523  RREVEQRAAARQKRRARFENKRASAMEIEGSSLKIEGESSTDESDTETSAYKETRDSLLQ 582

Query: 216  IAEQVFSDASEEYSQLSVVKERFERWKRDYPSSYNDAYMSLSIPAIFSPYVRLELLKWDP 37
             A++VFSDASEEYSQLS VK RFERWKRDY S+Y DAYMSL++P+IFSPYVRLELLKWDP
Sbjct: 583  CADKVFSDASEEYSQLSRVKARFERWKRDYSSTYRDAYMSLTVPSIFSPYVRLELLKWDP 642

Query: 36   LHEDSDFIDTKW 1
            LH+D DF D KW
Sbjct: 643  LHQDVDFFDMKW 654


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