BLASTX nr result

ID: Bupleurum21_contig00027696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027696
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519325.1| DNA binding protein, putative [Ricinus commu...    57   2e-06
ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06
ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002519325.1| DNA binding protein, putative [Ricinus communis]
           gi|223541640|gb|EEF43189.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 186

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
 Frame = -2

Query: 272 PYRCPSCQNPNLSFFNWETE---SIDENLARQFLAAAKIAMISMRRAAQEARKVAERR 108
           P+ CP C +PN SFFN   +   SID + AR  +AAAKIA +SM +AA  AR  AERR
Sbjct: 87  PFLCPPCSSPNFSFFNLPHDDDVSIDIDSARALVAAAKIAAVSMAKAAALARLEAERR 144


>ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|222852583|gb|EEE90130.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
 Frame = -2

Query: 272 PYRCPSCQNPNLSFFNWETES-------IDENLARQFLAAAKIAMISMRRAAQEARKVAE 114
           P+ CPSC +PN SFFN  T         ID + AR  +AAAKIA +SM +AA  A+  AE
Sbjct: 88  PFICPSCSSPNFSFFNPTTNGDSPSGRIIDRDSARALVAAAKIAAVSMTKAAAMAKVEAE 147

Query: 113 RR 108
           +R
Sbjct: 148 KR 149


>ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|222864507|gb|EEF01638.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
 Frame = -2

Query: 272 PYRCPSCQNPNLSFFNWETES-------IDENLARQFLAAAKIAMISMRRAAQEARKVAE 114
           P+ CPSC +PN SFFN            ID++ AR  +AAAKIA ISM +AA  AR  AE
Sbjct: 88  PFICPSCSSPNFSFFNPTRNGDSSSGRFIDKDSARALVAAAKIASISMTKAAALARVEAE 147

Query: 113 RR 108
           +R
Sbjct: 148 KR 149


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