BLASTX nr result

ID: Bupleurum21_contig00027682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027682
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW70820.1| putative RNA helicase family protein [Zea mays]        219   2e-55
ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [S...   219   2e-55
gb|ACN34981.1| unknown [Zea mays]                                     219   2e-55
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   219   2e-55
ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-55

>gb|AFW70820.1| putative RNA helicase family protein [Zea mays]
          Length = 1236

 Score =  219 bits (557), Expect = 2e-55
 Identities = 104/108 (96%), Positives = 108/108 (100%)
 Frame = +3

Query: 3    QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDRYKLDIVSA 182
            QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLL+IMDRYKLD+VSA
Sbjct: 1055 QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSA 1114

Query: 183  GKNYSKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR 326
            GKN++KIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR
Sbjct: 1115 GKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR 1162


>ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [Sorghum bicolor]
            gi|241922205|gb|EER95349.1| hypothetical protein
            SORBIDRAFT_01g044300 [Sorghum bicolor]
          Length = 1242

 Score =  219 bits (557), Expect = 2e-55
 Identities = 104/108 (96%), Positives = 108/108 (100%)
 Frame = +3

Query: 3    QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDRYKLDIVSA 182
            QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLL+IMDRYKLD+VSA
Sbjct: 1061 QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSA 1120

Query: 183  GKNYSKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR 326
            GKN++KIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR
Sbjct: 1121 GKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR 1168


>gb|ACN34981.1| unknown [Zea mays]
          Length = 422

 Score =  219 bits (557), Expect = 2e-55
 Identities = 104/108 (96%), Positives = 108/108 (100%)
 Frame = +3

Query: 3   QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDRYKLDIVSA 182
           QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLL+IMDRYKLD+VSA
Sbjct: 241 QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSA 300

Query: 183 GKNYSKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR 326
           GKN++KIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR
Sbjct: 301 GKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR 348


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  219 bits (557), Expect = 2e-55
 Identities = 104/108 (96%), Positives = 108/108 (100%)
 Frame = +3

Query: 3    QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDRYKLDIVSA 182
            QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD+YKLD+VSA
Sbjct: 996  QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSA 1055

Query: 183  GKNYSKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR 326
            GKN++KIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR
Sbjct: 1056 GKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR 1103


>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
            predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  219 bits (557), Expect = 2e-55
 Identities = 104/108 (96%), Positives = 108/108 (100%)
 Frame = +3

Query: 3    QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDRYKLDIVSA 182
            QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD+YKLD+VSA
Sbjct: 990  QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSA 1049

Query: 183  GKNYSKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR 326
            GKN++KIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR
Sbjct: 1050 GKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR 1097


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