BLASTX nr result

ID: Bupleurum21_contig00027659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027659
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            66   3e-09
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    66   3e-09
emb|CAN79490.1| hypothetical protein VITISV_033371 [Vitis vinifera]    64   2e-08

>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/162 (29%), Positives = 84/162 (51%)
 Frame = -3

Query: 488 VKEARNNLYSTQASLMQNRHNKNLLELEKE*ANILNSLLIQEESLMKQKSRVKWLKEGDS 309
           VK+A+N +   Q +L     N  L   E++  +   S +  EES  KQK+R++WL  GD 
Sbjct: 274 VKDAKNEMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQ 333

Query: 308 NTSFFFNQVKANWNVNKILSIKNKNKEGLLIKGQDVVAGVVVDYYQDALATNNQHTLSDY 129
           NTS+F   V    N NK+LS+    ++G +++G + V   V+ Y+   L  +    + + 
Sbjct: 334 NTSYFHKSVNGRHNRNKLLSL--TREDGEVVEGHEAVKSEVIAYFHRVLGVDQMPRVLNE 391

Query: 128 DFEFDNLNFKQITNDQANILDMIVSEDLILQTIKSMKKGKAP 3
           +     +N K +++ Q ++L  +V+   I   + S+K  KAP
Sbjct: 392 EVMESAINLK-LSSTQQHVLAQVVTRKEIKHAMFSLKNNKAP 432


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/130 (29%), Positives = 66/130 (50%)
 Frame = -3

Query: 488  VKEARNNLYSTQASLMQNRHNKNLLELEKE*ANILNSLLIQEESLMKQKSRVKWLKEGDS 309
            V++A+N +   Q +L     N  L   E++  +   S +  EES  KQK+R++WL  GD 
Sbjct: 680  VRDAKNKMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQ 739

Query: 308  NTSFFFNQVKANWNVNKILSIKNKNKEGLLIKGQDVVAGVVVDYYQDALATNNQHTLSDY 129
            NTS+F   V    N NK+LS+    ++G +++ Q+ V   V+ Y+   L  +    + + 
Sbjct: 740  NTSYFHKSVNGRQNRNKLLSL--TREDGEVVERQEAVKSEVISYFHRVLGVDQMPRVLNE 797

Query: 128  DFEFDNLNFK 99
            +     +N K
Sbjct: 798  EVMESAINLK 807


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
 Frame = -3

Query: 500 VPILVKEARNNLYSTQASLMQNRHNKNL-LELEKE*ANILNSLLIQEESLMKQKSRVKWL 324
           + +  KEA   L + Q   + N    N  LELE +   +L  L   EES   Q+SRV W 
Sbjct: 164 IELRTKEAHELLITCQNLTLANPSVSNAALELEAQRKWVL--LSCAEESFFHQRSRVSWF 221

Query: 323 KEGDSNTSFFFNQVKANWNVNKILSIKNKNKEGLLIKGQDVVAGVVVDYYQDALATNNQH 144
            EGDSNT +F   V +  + N I S+ + N  GLLI  Q  +    V YY+  L +    
Sbjct: 222 AEGDSNTHYFHRMVDSRKSFNTINSLVDSN--GLLIDSQQGILDHCVTYYERLLGSIE-- 277

Query: 143 TLSDYDFEFDNLNF---KQITNDQANILDMIVSEDLILQTIKSMKKGK 9
             S +  E +++N     + + DQ + L+   ++D I    KS+ + K
Sbjct: 278 --SPFSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNK 323


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
 Frame = -3

Query: 500 VPILVKEARNNLYSTQASLMQNRHNKNL-LELEKE*ANILNSLLIQEESLMKQKSRVKWL 324
           + +  KEA   L + Q   + N    N  LELE +   +L  L   EES   Q+SRV W 
Sbjct: 164 IELRTKEAHELLITCQNLTLANPSVSNAALELEAQRKWVL--LSCAEESFFHQRSRVSWF 221

Query: 323 KEGDSNTSFFFNQVKANWNVNKILSIKNKNKEGLLIKGQDVVAGVVVDYYQDALATNNQH 144
            EGDSNT +F   V +  + N I S+ + N  GLLI  Q  +    V YY+  L +    
Sbjct: 222 AEGDSNTHYFHRMVDSRKSFNTINSLVDSN--GLLIDSQQGILDHCVTYYERLLGSIE-- 277

Query: 143 TLSDYDFEFDNLNF---KQITNDQANILDMIVSEDLILQTIKSMKKGK 9
             S +  E +++N     + + DQ + L+   ++D I    KS+ + K
Sbjct: 278 --SPFSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNK 323


>emb|CAN79490.1| hypothetical protein VITISV_033371 [Vitis vinifera]
          Length = 1341

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/161 (27%), Positives = 79/161 (49%)
 Frame = -3

Query: 485  KEARNNLYSTQASLMQNRHNKNLLELEKE*ANILNSLLIQEESLMKQKSRVKWLKEGDSN 306
            K   N+L +  A   +   N +LL         L  L+++EE   +QKSRVKW+KEGD N
Sbjct: 873  KSILNDLANFDAIEQKGGLNSDLLSQRASRKGELEELILREEIHWRQKSRVKWVKEGDCN 932

Query: 305  TSFFFNQVKANWNVNKILSIKNKNKEGLLIKGQDVVAGVVVDYYQDALATNNQHTLSDYD 126
            + F+     AN   N+    + +N+ GLL+K  + +   ++ Y++    +    +     
Sbjct: 933  SKFYHKM--ANGRRNRKYIKELENERGLLLKNAESITEEILHYFEKLYTSPIGES----- 985

Query: 125  FEFDNLNFKQITNDQANILDMIVSEDLILQTIKSMKKGKAP 3
            +  + L++  I+ + A  LD   +E+ I + I  + + KAP
Sbjct: 986  WGVEGLDWSPISEESALRLDSPFTEEEISKAIFQLDRDKAP 1026


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