BLASTX nr result

ID: Bupleurum21_contig00027652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027652
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514286.1| hypothetical protein RCOM_1052490 [Ricinus c...   103   1e-20
ref|XP_002280856.2| PREDICTED: uncharacterized protein LOC100250...   103   1e-20
emb|CAN70392.1| hypothetical protein VITISV_020518 [Vitis vinifera]   102   4e-20
ref|XP_002324996.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_003620613.1| hypothetical protein MTR_6g087760 [Medicago ...    82   3e-14

>ref|XP_002514286.1| hypothetical protein RCOM_1052490 [Ricinus communis]
           gi|223546742|gb|EEF48240.1| hypothetical protein
           RCOM_1052490 [Ricinus communis]
          Length = 887

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/111 (53%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
 Frame = +3

Query: 108 YRSFVTCDDPKGVVNCSAIRXXXXXXXXXXXXXXXXXXXXXXXFTS--HYEGNKELVFEE 281
           YRSFVTCDDPKGVV C  IR                        TS  H    +E+V + 
Sbjct: 2   YRSFVTCDDPKGVVECGTIRKSKSVSQKIEEDKIKTHRTRKNSNTSLAHKGKKEEMVPKG 61

Query: 282 GTKDSDRASSFQLLEVSRGAQKLNQVIDSWSKRKSFDGQSKDIAKDLLMGA 434
             +D+   SSFQLLEVSRGAQKLN +IDSWSK  ++DGQSKDIAKDLL GA
Sbjct: 62  NAEDNHSPSSFQLLEVSRGAQKLNHLIDSWSKGLNYDGQSKDIAKDLLKGA 112


>ref|XP_002280856.2| PREDICTED: uncharacterized protein LOC100250746 [Vitis vinifera]
          Length = 860

 Score =  103 bits (257), Expect = 1e-20
 Identities = 62/123 (50%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
 Frame = +3

Query: 72  KTMPHDNLRSVGYRSFVTCDDPKGVVNCSAIRXXXXXXXXXXXXXXXXXXXXXXXFTSHY 251
           + MP D+ RSVGYRSFVTCDDPKGVV C  IR                        TS  
Sbjct: 2   QNMPQDSRRSVGYRSFVTCDDPKGVVECGTIR-KSKNDSKKLKHKIESRGTPKKSITSLI 60

Query: 252 --EGNKELVFEEGTKDSDRASSFQLLEVSRGAQKLNQVIDSWSKRKSFDGQSKDIAKDLL 425
             E  +E+  +  T+     S+FQLLEVSRGAQKLN++IDSWS+  S D QS DIAKDLL
Sbjct: 61  CKEERREMESKGTTEGLHNPSTFQLLEVSRGAQKLNKMIDSWSQGPSIDEQSNDIAKDLL 120

Query: 426 MGA 434
            GA
Sbjct: 121 KGA 123


>emb|CAN70392.1| hypothetical protein VITISV_020518 [Vitis vinifera]
          Length = 808

 Score =  102 bits (253), Expect = 4e-20
 Identities = 62/125 (49%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
 Frame = +3

Query: 66  EKKTMPHDNLRSVGYRSFVTCDDPKGVVNCSAIRXXXXXXXXXXXXXXXXXXXXXXXFTS 245
           E   MP D+ RSVGYRSFVTCDDPKGVV C  IR                        TS
Sbjct: 11  EAVNMPQDSRRSVGYRSFVTCDDPKGVVECGTIRKSKNDSKKLKHKIESRGTPKKS-ITS 69

Query: 246 HY--EGNKELVFEEGTKDSDRASSFQLLEVSRGAQKLNQVIDSWSKRKSFDGQSKDIAKD 419
               E  +E+  +  T+     S+FQLLEVSRGAQKLN++IDSWS+  S D  S DIAKD
Sbjct: 70  LICKEERREMESKGXTEGLHNPSTFQLLEVSRGAQKLNKMIDSWSQGPSIDEXSNDIAKD 129

Query: 420 LLMGA 434
           LL GA
Sbjct: 130 LLKGA 134


>ref|XP_002324996.1| predicted protein [Populus trichocarpa] gi|222866430|gb|EEF03561.1|
           predicted protein [Populus trichocarpa]
          Length = 899

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 57/110 (51%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
 Frame = +3

Query: 108 YRSFVTCDDPKGVVNCSAIRXXXXXXXXXXXXXXXXXXXXXXXFTSHYEGNKELVFEEGT 287
           YRSFVTCDDPKGVV C  IR                               K+ +  +G 
Sbjct: 2   YRSFVTCDDPKGVVECGTIRKSKSGSHKMEHEIISHKAQKNSKADLTVIAEKKELVSKGI 61

Query: 288 KDSDRA-SSFQLLEVSRGAQKLNQVIDSWSKRKSFDGQSKDIAKDLLMGA 434
            +  R  SSFQLLEVSRGAQKLNQ I+SWSK  S DGQSKDIAKDLL GA
Sbjct: 62  VEEYRTPSSFQLLEVSRGAQKLNQTINSWSKGLSSDGQSKDIAKDLLKGA 111


>ref|XP_003620613.1| hypothetical protein MTR_6g087760 [Medicago truncatula]
           gi|355495628|gb|AES76831.1| hypothetical protein
           MTR_6g087760 [Medicago truncatula]
          Length = 831

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/109 (43%), Positives = 61/109 (55%)
 Frame = +3

Query: 108 YRSFVTCDDPKGVVNCSAIRXXXXXXXXXXXXXXXXXXXXXXXFTSHYEGNKELVFEEGT 287
           Y+ FVTCDDPKGVV C +IR                         ++ +  +E V +  T
Sbjct: 2   YKPFVTCDDPKGVVECGSIRRYRSNSHKMKDKTKSRKPAEN--LETNKQDKEEKVSKGST 59

Query: 288 KDSDRASSFQLLEVSRGAQKLNQVIDSWSKRKSFDGQSKDIAKDLLMGA 434
           +     SS QL+EVSRGA KLN +I+SWS+   +DG+S DIAKDLL GA
Sbjct: 60  ERDFDPSSLQLVEVSRGAAKLNNMIESWSRGVRYDGKSDDIAKDLLKGA 108


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