BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027628
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    82   5e-14
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    81   8e-14
ref|XP_002525921.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
ref|XP_002532007.1| conserved hypothetical protein [Ricinus comm...    74   1e-11

>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 52/131 (39%), Positives = 76/131 (58%)
 Frame = -2

Query: 397 PVFNSVKVNTYAAIFDDLNCFSHALVIRKHDGALVEARSKCMRGNSSPELAEAIGIREAL 218
           P   S+KVN  A IF + +      V++ H G  V A +    G   PE+AE + I+EAL
Sbjct: 31  PSLGSMKVNMDATIFSNPDSMGVGCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLAIQEAL 90

Query: 217 SWVKESKQADVVIESDCLQVVQAVRSSFVCYSYLERVIKECRNILANLSNKNIMFRFVKR 38
           SW ++ +  +VV E DCL +V+A+       S L  +IK+C+ + +++S  N  F FVKR
Sbjct: 91  SWARDRQLLNVVFELDCLHIVEALLRKGTDRSSLGLIIKDCKLLSSSIS--NCSFAFVKR 148

Query: 37  SANKVAHYLAR 5
           S N+VAH LAR
Sbjct: 149 SRNEVAHKLAR 159


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/132 (32%), Positives = 74/132 (56%)
 Frame = -2

Query: 403  QPPVFNSVKVNTYAAIFDDLNCFSHALVIRKHDGALVEARSKCMRGNSSPELAEAIGIRE 224
            Q P +  +K+N   A+F D        V R H G  +   +K     + P++ EA+G+RE
Sbjct: 665  QKPDYGWIKINVDGAVFPDKGAIG--AVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVRE 722

Query: 223  ALSWVKESKQADVVIESDCLQVVQAVRSSFVCYSYLERVIKECRNILANLSNKNIMFRFV 44
             LSW+ E  ++ +V+E+DCL+VVQA++      +    +I +C ++L +L +  ++  + 
Sbjct: 723  VLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVV--YA 780

Query: 43   KRSANKVAHYLA 8
            +RSAN  AH LA
Sbjct: 781  RRSANSAAHCLA 792


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/133 (33%), Positives = 72/133 (54%)
 Frame = -2

Query: 403 QPPVFNSVKVNTYAAIFDDLNCFSHALVIRKHDGALVEARSKCMRGNSSPELAEAIGIRE 224
           QPP    +K N  AAIF + N F   + +R   G  ++A +    G   P+ AEA+G+R+
Sbjct: 58  QPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRD 117

Query: 223 ALSWVKESKQADVVIESDCLQVVQAVRSSFVCYSYLERVIKECRNILANLSNKNIMFRFV 44
           A+ W+ + + ++V +E DC  VV ++       +    +I +CR++L   +N  I   FV
Sbjct: 118 AILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKI--SFV 175

Query: 43  KRSANKVAHYLAR 5
           +R AN VAH  AR
Sbjct: 176 RRQANVVAHSFAR 188


>ref|XP_002525921.1| conserved hypothetical protein [Ricinus communis]
           gi|223534750|gb|EEF36441.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/126 (35%), Positives = 69/126 (54%)
 Frame = -2

Query: 382 VKVNTYAAIFDDLNCFSHALVIRKHDGALVEARSKCMRGNSSPELAEAIGIREALSWVKE 203
           +K+N  A IF   N   + +V+R H   LV AR+  + G     LAEA+ +REALSW+K 
Sbjct: 61  LKINEDAGIFQAQNRTGYGMVVRNHAANLVAARALIIHGVYEANLAEAMAVREALSWIKH 120

Query: 202 SKQADVVIESDCLQVVQAVRSSFVCYSYLERVIKECRNILANLSNKNIMFRFVKRSANKV 23
              + V I+ D L V  A+ S  + +     +I  C++++AN+   +  F  ++RS N  
Sbjct: 121 MNWSRVSIDMDSLGVCVALTSDNLSFGL---IIDGCKHVVANI--HDAAFTCIRRSTNHC 175

Query: 22  AHYLAR 5
           AH LAR
Sbjct: 176 AHMLAR 181


>ref|XP_002532007.1| conserved hypothetical protein [Ricinus communis]
           gi|223528338|gb|EEF30380.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 273

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 47/131 (35%), Positives = 67/131 (51%)
 Frame = -2

Query: 397 PVFNSVKVNTYAAIFDDLNCFSHALVIRKHDGALVEARSKCMRGNSSPELAEAIGIREAL 218
           PV   +K N    +F   N      + +   G    A +  + G   P++AEA+ +RE L
Sbjct: 132 PVEGWLKCNIDVVVFVANNRLGFGFIFQNDSGTFRAATNGLISGPLDPQVAEALSLREDL 191

Query: 217 SWVKESKQADVVIESDCLQVVQAVRSSFVCYSYLERVIKECRNILANLSNKNIMFRFVKR 38
            WVK      VV ESDCL +V AV    V  S    +I +CR+ L  +++ +I+  FVKR
Sbjct: 192 CWVKGLDLNYVVSESDCLTLVNAVNKVGVNSSLFGLLIGDCRSFLKEMNHAHIV--FVKR 249

Query: 37  SANKVAHYLAR 5
             N+VAH LAR
Sbjct: 250 FGNRVAHLLAR 260