BLASTX nr result

ID: Bupleurum21_contig00027624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027624
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83252.1| hypothetical protein VITISV_034795 [Vitis vinife...   185   5e-45
ref|XP_002336388.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_003526498.1| PREDICTED: uncharacterized protein LOC100798...   174   7e-42
ref|XP_002308594.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
gb|ABK96434.1| unknown [Populus trichocarpa x Populus deltoides]      165   4e-39

>emb|CAN83252.1| hypothetical protein VITISV_034795 [Vitis vinifera]
           gi|296081829|emb|CBI20834.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score =  185 bits (469), Expect = 5e-45
 Identities = 84/156 (53%), Positives = 112/156 (71%), Gaps = 2/156 (1%)
 Frame = -1

Query: 515 WEGIVSTKLKDTKAEKIWPLLEDFCSFHKWLPSIDTCYKLEGDDGQPGLIRYCSTTIRS- 339
           WEG  + +LK TK +++WP LEDFCS HKW+PS+DTCY++EG  GQPGLIRYCS+T  S 
Sbjct: 9   WEGKATAELKSTKPDQVWPFLEDFCSLHKWMPSLDTCYQVEGVKGQPGLIRYCSSTAASP 68

Query: 338 -SSDESITMWCHEKLIEIDHIQRLLSYEIMENNMGFKMYKSTLKVMELMEGGDESGCEIK 162
            + D++   W  EKL+ ID I    SYE+++NNMGF  Y +T KV+ +  G    GC I+
Sbjct: 69  DNPDQTTVNWVKEKLLTIDPINHCFSYEVLDNNMGFNSYVTTFKVIPINGG----GCLIQ 124

Query: 161 WLFVADPVEGWKFEDLVSYIESSLHAMAQRMEKAPQ 54
           W FV DPV+GW++EDL SYI+SSL  MA++ME+  Q
Sbjct: 125 WSFVCDPVQGWRYEDLASYIDSSLQFMAKKMEETLQ 160


>ref|XP_002336388.1| predicted protein [Populus trichocarpa] gi|222834873|gb|EEE73322.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  176 bits (447), Expect = 2e-42
 Identities = 81/167 (48%), Positives = 113/167 (67%), Gaps = 7/167 (4%)
 Frame = -1

Query: 539 ITKGNNNVWEGIVSTKLKDTKAEKIWPLLEDFCSFHKWLPSIDTCYKLEGDDGQPGLIRY 360
           +T+     WEG  + +LK   A+++WP LEDFC+  KWLP +DTCY++EG+ GQPGL+RY
Sbjct: 1   MTEETQGKWEGKATVELKGPTADQVWPFLEDFCNLQKWLPGVDTCYQVEGELGQPGLVRY 60

Query: 359 CSTTIRSSS---DESITMWCHEKLIEIDHIQRLLSYEIMENNMGFKMYKSTLKVMELMEG 189
           CS+   SS    + +  +W  EKLI I+  +R LSYEI+ENN GFK Y +T+K   + +G
Sbjct: 61  CSSGTASSDGSHEGNKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKAFPINDG 120

Query: 188 GDES----GCEIKWLFVADPVEGWKFEDLVSYIESSLHAMAQRMEKA 60
            ++     GC+I+W F+ADP+EGW  ED  SYI SSL  M Q+ME+A
Sbjct: 121 DEDGDGQHGCKIEWSFIADPIEGWPLEDFNSYINSSLQFMGQKMEQA 167


>ref|XP_003526498.1| PREDICTED: uncharacterized protein LOC100798368 [Glycine max]
          Length = 187

 Score =  174 bits (442), Expect = 7e-42
 Identities = 92/182 (50%), Positives = 120/182 (65%), Gaps = 5/182 (2%)
 Frame = -1

Query: 575 IFSLSLSKMAEEITKGNNNVWEGIVSTKLKDTKAEKIWPLLEDFCSFHKWLPSIDTCYKL 396
           I  +    MAEE    +   WEG   T+L  T AE++W  LEDFC+ HKW P I+TCY+L
Sbjct: 13  IIIIQFLTMAEE----SKPKWEGKSVTELPGTDAEQVWTALEDFCNLHKWWP-IETCYQL 67

Query: 395 EGDDGQPGLIRYCSTTIRSS-----SDESITMWCHEKLIEIDHIQRLLSYEIMENNMGFK 231
           EG  GQPGLIRYC++T+  +        +   W  EKL+ ID +QR LSYEI+ENNMGFK
Sbjct: 68  EGVPGQPGLIRYCASTVEEAVVGAQKTTTTIKWTKEKLLAIDPVQRCLSYEIVENNMGFK 127

Query: 230 MYKSTLKVMELMEGGDESGCEIKWLFVADPVEGWKFEDLVSYIESSLHAMAQRMEKAPQS 51
            Y +TLKV+ +   GD  GC+I W FV DPVEGW F+DL  Y+ESSL +MA++++ A  S
Sbjct: 128 SYVATLKVLPM--NGD--GCKIDWGFVCDPVEGWSFQDLKLYLESSLQSMAKKIQLACSS 183

Query: 50  TN 45
           T+
Sbjct: 184 TS 185


>ref|XP_002308594.1| predicted protein [Populus trichocarpa] gi|222854570|gb|EEE92117.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  174 bits (442), Expect = 7e-42
 Identities = 82/164 (50%), Positives = 113/164 (68%), Gaps = 5/164 (3%)
 Frame = -1

Query: 539 ITKGNNNVWEGIVSTKLKDTKAEKIWPLLEDFCSFHKWLPSIDTCYKLEGDDGQPGLIRY 360
           +T+     WEG  + +LK   A+++WP LEDFC+  KWLP +DTCY++EG+ GQPGL+RY
Sbjct: 1   MTEETQGKWEGKATVELKGPTADQVWPFLEDFCNLQKWLPGVDTCYQVEGELGQPGLVRY 60

Query: 359 CSTTIRSSS---DESITMWCHEKLIEIDHIQRLLSYEIMENNMGFKMYKSTLKVMELMEG 189
           CS+   SS    + +  +W  EKLI I+  +R LSYEI+ENN GFK Y +T+KV  + +G
Sbjct: 61  CSSGTASSDGSHEGNKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKVSPINDG 120

Query: 188 -GD-ESGCEIKWLFVADPVEGWKFEDLVSYIESSLHAMAQRMEK 63
            GD + GC I+W F+ADP+EGW  ED  SYI SSL  M ++ME+
Sbjct: 121 DGDGQHGCTIEWSFIADPIEGWPLEDFNSYINSSLQFMGKKMER 164


>gb|ABK96434.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 171

 Score =  165 bits (418), Expect = 4e-39
 Identities = 79/166 (47%), Positives = 111/166 (66%), Gaps = 7/166 (4%)
 Frame = -1

Query: 539 ITKGNNNVWEGIVSTKLKDTKAEKIWPLLEDFCSFHKWLPSIDTCYKLEGDDGQPGLIRY 360
           +T+     WEG  + +L+   A+++WP LEDFC+  KWLP +DTCY++EG+ GQPGL+R 
Sbjct: 1   MTEETQAKWEGKATVELRGPTADQVWPCLEDFCNLQKWLPRVDTCYRVEGELGQPGLVRC 60

Query: 359 CSTTIRSS-----SDESITMWCHEKLIEIDHIQRLLSYEIMENNMGFKMYKSTLKVMELM 195
           C+ +   S      +E+  +W  EKLI I+  +R LSYEI+ENN GFK Y +T+KV  + 
Sbjct: 61  CNFSKVPSEGSHEDEENKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKVSPIN 120

Query: 194 EG-GD-ESGCEIKWLFVADPVEGWKFEDLVSYIESSLHAMAQRMEK 63
           +G GD   GC I+W F+ADP+EGW  ED  SYI SSL  M ++ME+
Sbjct: 121 DGDGDGHHGCTIEWSFIADPIEGWPLEDFNSYINSSLQFMGKKMER 166


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