BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027616
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...   114   6e-24
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...   111   5e-23
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   110   2e-22
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   108   3e-22
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   108   5e-22

>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 7/137 (5%)
 Frame = -3

Query: 403 DFLKKAPLLEEFALTFTIISEETVADVSRYCPMLKSFIYNNNGWKYSNGMSTADDF---- 236
           D  +K P LEE  ++ + +S+     + R CP LK+  +N+ G+++ +     DD     
Sbjct: 139 DAAEKFPCLEELDISISNLSDRLFEPIGRRCPRLKTLKFNSQGYRHPHIQYDDDDEDAYD 198

Query: 235 ---VIAVAKGMPQLLHLQLTGNEMTNKGLQAILDGCPNLQSLDLRGCIYINLNESCGKLC 65
                A+AK MP L HLQL GNEMTN GL A+LDGCP+L+SLD+R C  +NL  + GK C
Sbjct: 199 DNEAFAIAKYMPGLRHLQLIGNEMTNDGLVALLDGCPHLESLDIRRCFNVNLVGTLGKRC 258

Query: 64  KERIKNLRLPSDSMEGH 14
           KE+IK  RLP D+ + +
Sbjct: 259 KEQIKYFRLPHDATDDY 275


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score =  111 bits (278), Expect = 5e-23
 Identities = 62/125 (49%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
 Frame = -3

Query: 397 LKKAPLLEEFALTFTIISEETVADVSRYCPMLKSFIYNNNGW-KYSNGMSTADDFVIAVA 221
           + K PLLE   +++ + S E++ D+ R CP LK+   N      +SN  S  DD   A+A
Sbjct: 299 VSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSN--SGFDDNAKAIA 356

Query: 220 KGMPQLLHLQLTGNEMTNKGLQAILDGCPNLQSLDLRGCIYINLNESCGKLCKERIKNLR 41
           + MP+L HLQL GN +TNKGL AILDGCP+L+ LDLR C  INL     K C ERIK+LR
Sbjct: 357 ESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIKDLR 416

Query: 40  LPSDS 26
            P+DS
Sbjct: 417 CPNDS 421



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/83 (49%), Positives = 52/83 (62%)
 Frame = -3

Query: 274 WKYSNGMSTADDFVIAVAKGMPQLLHLQLTGNEMTNKGLQAILDGCPNLQSLDLRGCIYI 95
           W+Y       DD  +A+A+ MP+L HL+L GN +TN  L+AILD C +L  LDLR C  I
Sbjct: 16  WRY-------DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNI 68

Query: 94  NLNESCGKLCKERIKNLRLPSDS 26
           NL     K C ERI++LR P DS
Sbjct: 69  NLLGDLEKRCSERIRDLRRPDDS 91


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/137 (41%), Positives = 84/137 (61%)
 Frame = -3

Query: 412 SWSDFLKKAPLLEEFALTFTIISEETVADVSRYCPMLKSFIYNNNGWKYSNGMSTADDFV 233
           ++S   KK PLLEE  +++  +S E +  V   CP+L+S   N  G+K  +  S  +   
Sbjct: 132 AFSKAAKKFPLLEELDISYCSLSTEALVGVGISCPLLRSLKLNCQGYKRPHIESNEE--A 189

Query: 232 IAVAKGMPQLLHLQLTGNEMTNKGLQAILDGCPNLQSLDLRGCIYINLNESCGKLCKERI 53
           +A+ + MP L +LQ+ GN++TN G+QAILDGCP+L+ LDLR C  ++L    G LC ERI
Sbjct: 190 LAIGQWMPHLRYLQIFGNKLTNDGVQAILDGCPHLEFLDLRQCFNVHLEGELGMLCGERI 249

Query: 52  KNLRLPSDSMEGHKIAP 2
           K+LR P D  + +   P
Sbjct: 250 KDLRRPDDPTDDYPFNP 266


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/132 (43%), Positives = 84/132 (63%)
 Frame = -3

Query: 406 SDFLKKAPLLEEFALTFTIISEETVADVSRYCPMLKSFIYNNNGWKYSNGMSTADDFVIA 227
           S+ +K+ PLL E  L +   S+E +  + + CP LKSF  N  G+++ +     D+  +A
Sbjct: 135 SEGIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPH--IECDEEALA 192

Query: 226 VAKGMPQLLHLQLTGNEMTNKGLQAILDGCPNLQSLDLRGCIYINLNESCGKLCKERIKN 47
           +A+ MP L  LQL GN++TN GL AILDGC +L+SLDLR C  +NL  +  K C E+IK 
Sbjct: 193 IAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRCAEQIKI 252

Query: 46  LRLPSDSMEGHK 11
           LR P+DS + ++
Sbjct: 253 LRYPNDSTDDYE 264


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/130 (42%), Positives = 83/130 (63%)
 Frame = -3

Query: 403 DFLKKAPLLEEFALTFTIISEETVADVSRYCPMLKSFIYNNNGWKYSNGMSTADDFVIAV 224
           +  +K P LEE  ++ + ++++ +  + + CP LK+  +N  G++  +     D+   A+
Sbjct: 129 EIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLKTLKFNMEGYRRPH--IECDEEAFAI 186

Query: 223 AKGMPQLLHLQLTGNEMTNKGLQAILDGCPNLQSLDLRGCIYINLNESCGKLCKERIKNL 44
           A+ MP L HLQL GN++TN+GL AILDGCP L+SLDLR C  +NL  S GK C E+IK L
Sbjct: 187 AETMPGLHHLQLFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLGKRCAEQIKEL 246

Query: 43  RLPSDSMEGH 14
           RLP D  + +
Sbjct: 247 RLPCDPTDDY 256