BLASTX nr result

ID: Bupleurum21_contig00027604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027604
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571789.1| PREDICTED: uncharacterized protein LOC100839...    63   2e-08
ref|XP_002468357.1| hypothetical protein SORBIDRAFT_01g044485 [S...    61   1e-07
ref|XP_003559642.1| PREDICTED: uncharacterized protein LOC100826...    60   2e-07
ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [S...    59   5e-07
ref|XP_003576341.1| PREDICTED: uncharacterized protein LOC100830...    58   9e-07

>ref|XP_003571789.1| PREDICTED: uncharacterized protein LOC100839103 [Brachypodium
           distachyon]
          Length = 291

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 8/150 (5%)
 Frame = -2

Query: 426 LSKLVY*ADKRDLWTWVCTIRQQASTADFETFIVAAWSIWGNRNKLVHKGKGYDPMDTMF 247
           LS+ V   D  D   W+  + +     DF   +   W+IW  R K +H+ K   P+ T  
Sbjct: 38  LSEHVIQNDIPDANLWLFMLLESTPQCDFAVILTTLWAIWWARRKAIHEDKYQSPLSTFT 97

Query: 246 FVKQYL--------IRYKETQDFFSCPRSPQMQRTWQPPLTAAIKVNFDASINRTMGGAN 91
           F++++          +  E +    C         W PP + A K+N DA + R+     
Sbjct: 98  FIQRFFEDLSIVADEKTVEPKQLHGCKDKALAVPRWIPPPSGACKINVDAGLARSGAAGA 157

Query: 90  LGVVARGSEGNVIVWQTKMVPFIQDPTHAE 1
           L  V R   G  +   T ++  + DPT  E
Sbjct: 158 LDAVCRDEHGKFLGASTVIILGMTDPTTLE 187


>ref|XP_002468357.1| hypothetical protein SORBIDRAFT_01g044485 [Sorghum bicolor]
           gi|241922211|gb|EER95355.1| hypothetical protein
           SORBIDRAFT_01g044485 [Sorghum bicolor]
          Length = 212

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
 Frame = -2

Query: 354 STADFETFIVAAWSIWGNRNKLVHKGKGYDPMDTMFFVKQYLIRYK-----ETQDFFSCP 190
           S  +F+  ++  W+IW  R   +H+G    P+    F+ +YL   K     E  D     
Sbjct: 4   SAKEFQKLLIICWAIWRARRMALHEGIFQSPLSIFSFITKYLDDLKLAGLIEDIDMTKST 63

Query: 189 RSPQMQRTWQPPLTAAIKVNFDASINRTMGGANLGVVARGSEGNVIVWQTKMVPFIQDPT 10
           R+ +    W PP  A +K N DA++ R      + VV R + GN +     ++  + DP+
Sbjct: 64  RNKKSAPKWIPPPEAFVKFNVDAAVARAEDKGTVTVVCRDNVGNYVAASAMVIDGLTDPS 123

Query: 9   HAE 1
             E
Sbjct: 124 SLE 126


>ref|XP_003559642.1| PREDICTED: uncharacterized protein LOC100826081 [Brachypodium
           distachyon]
          Length = 286

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 4/135 (2%)
 Frame = -2

Query: 393 DLWTWVCTIRQQASTADFETFIVAAWSIWGNRNKLVHKGKGYDPMDTMFFVKQYLIRYKE 214
           D   W+  + +  S A+F   I+  W+IW  R K +H+     P+    FV + L   + 
Sbjct: 49  DAREWLFHMIETTSHAEFTQIILTLWAIWTTRQKAIHESMFQSPVSIHGFVAKMLSELQV 108

Query: 213 TQDFFSC---PRSPQM-QRTWQPPLTAAIKVNFDASINRTMGGANLGVVARGSEGNVIVW 46
            Q   SC   PR P      W PP T  +K+N D  + +T        + R   G  +  
Sbjct: 109 VQSNSSCRSQPRRPAAPSPRWIPPPTRMLKINVDGGVAKTQYKGASAAICRDESGRYVGS 168

Query: 45  QTKMVPFIQDPTHAE 1
             ++   I DP   E
Sbjct: 169 SARVFEGITDPATLE 183


>ref|XP_002446679.1| hypothetical protein SORBIDRAFT_06g020406 [Sorghum bicolor]
           gi|241937862|gb|EES11007.1| hypothetical protein
           SORBIDRAFT_06g020406 [Sorghum bicolor]
          Length = 395

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
 Frame = -2

Query: 381 WVCTIRQQASTADFETFIVAAWSIWGNRNKLVHKGKGYDPMDTMFFVKQYL-----IRYK 217
           W+  +      AD    +V  W+IW  R K +H+G    P   M  + + +     IR  
Sbjct: 163 WITFMCCNIPQADGIRVLVTCWAIWQARRKAIHEGVFQSPFSIMVTINRQIEELQMIRGM 222

Query: 216 ETQDFFSCPRSPQMQRTWQPPLTAAIKVNFDASINRTMGGANLGVVARGSEGNVIVWQTK 37
           E +   +  +S Q  R W+ P     K+N DA++NR      +GVV R   G  I     
Sbjct: 223 ELKGG-NQNQSKQKTRLWKAPDQGKCKINVDAAVNRVGSKGAVGVVCRNDRGEFIAPSAM 281

Query: 36  MVPFIQDPTHAE 1
           ++P I +P   E
Sbjct: 282 IIPNITEPETLE 293


>ref|XP_003576341.1| PREDICTED: uncharacterized protein LOC100830352 [Brachypodium
           distachyon]
          Length = 265

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 8/135 (5%)
 Frame = -2

Query: 381 WVCTIRQQASTADFETFIVAAWSIWGNRNKLVHKGKGYDPMDTMFFVKQYL--------I 226
           W+  + +     +F   +   W+IW  R K +H+ K    + T  F++++L         
Sbjct: 53  WLFMLMESTPQCNFAVILTTLWAIWWARRKAIHEDKYQSLLSTFTFIQRFLEDLSIVADE 112

Query: 225 RYKETQDFFSCPRSPQMQRTWQPPLTAAIKVNFDASINRTMGGANLGVVARGSEGNVIVW 46
           +  E +    C         W PP + A K+N DA + R+  G  L  V R   G  +  
Sbjct: 113 KTVEPKQLHGCKDKALAVPRWIPPPSGACKINVDAGLARSGAGGALAAVCRDENGKFLAA 172

Query: 45  QTKMVPFIQDPTHAE 1
            T  +  +  PT  E
Sbjct: 173 STVTILGMTAPTTLE 187


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