BLASTX nr result

ID: Bupleurum21_contig00027601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027601
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   155   3e-36
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...   155   3e-36
emb|CBI36896.3| unnamed protein product [Vitis vinifera]              151   5e-35
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   151   5e-35
ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35

>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score =  155 bits (392), Expect = 3e-36
 Identities = 77/110 (70%), Positives = 85/110 (77%)
 Frame = +1

Query: 1    METYEVQWISKXXXXXXXXXXXXXXPGHCYRLYSSAVFSNIFLDFSSAEISKIPVDGVVL 180
            +E YEVQWISK              PGHCYRLYSSAVFSN   DFS AEI+KIPVDGVVL
Sbjct: 774  IENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNTLPDFSLAEIAKIPVDGVVL 833

Query: 181  LMKSMGINKVANFPFPTPPEVADIIEAERCLKVLEALDTDGRLTSLGKAM 330
            LMKSMGI+KV NFPFPTPPE + ++EAE CLK LEALD+ GRLT+LGKAM
Sbjct: 834  LMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSGGRLTALGKAM 883


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score =  155 bits (392), Expect = 3e-36
 Identities = 77/110 (70%), Positives = 85/110 (77%)
 Frame = +1

Query: 1    METYEVQWISKXXXXXXXXXXXXXXPGHCYRLYSSAVFSNIFLDFSSAEISKIPVDGVVL 180
            +E YEVQWISK              PGHCYRLYSSAVFSN   DFS AEI+KIPVDGVVL
Sbjct: 774  IENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNTLPDFSLAEIAKIPVDGVVL 833

Query: 181  LMKSMGINKVANFPFPTPPEVADIIEAERCLKVLEALDTDGRLTSLGKAM 330
            LMKSMGI+KV NFPFPTPPE + ++EAE CLK LEALD+ GRLT+LGKAM
Sbjct: 834  LMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSGGRLTALGKAM 883


>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/110 (68%), Positives = 84/110 (76%)
 Frame = +1

Query: 1   METYEVQWISKXXXXXXXXXXXXXXPGHCYRLYSSAVFSNIFLDFSSAEISKIPVDGVVL 180
           METYEVQWISK              PGHCYRLYSSAVF+NI  DFS AEI K+PV+GV+L
Sbjct: 612 METYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFNNILPDFSMAEILKVPVEGVIL 671

Query: 181 LMKSMGINKVANFPFPTPPEVADIIEAERCLKVLEALDTDGRLTSLGKAM 330
           LMKSM I+KVANFPFPTPP+   + EAERCLK LEAL++ GRLT LGKAM
Sbjct: 672 LMKSMDIDKVANFPFPTPPDAIALAEAERCLKALEALNSKGRLTPLGKAM 721


>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/110 (68%), Positives = 84/110 (76%)
 Frame = +1

Query: 1    METYEVQWISKXXXXXXXXXXXXXXPGHCYRLYSSAVFSNIFLDFSSAEISKIPVDGVVL 180
            METYEVQWISK              PGHCYRLYSSAVF+NI  DFS AEI K+PV+GV+L
Sbjct: 853  METYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFNNILPDFSMAEILKVPVEGVIL 912

Query: 181  LMKSMGINKVANFPFPTPPEVADIIEAERCLKVLEALDTDGRLTSLGKAM 330
            LMKSM I+KVANFPFPTPP+   + EAERCLK LEAL++ GRLT LGKAM
Sbjct: 913  LMKSMDIDKVANFPFPTPPDAIALAEAERCLKALEALNSKGRLTPLGKAM 962


>ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|222844459|gb|EEE82006.1|
           predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  151 bits (381), Expect = 6e-35
 Identities = 74/110 (67%), Positives = 83/110 (75%)
 Frame = +1

Query: 1   METYEVQWISKXXXXXXXXXXXXXXPGHCYRLYSSAVFSNIFLDFSSAEISKIPVDGVVL 180
           ME YEVQWISK              PGHCYRLYSSAV++NI  DFS AEISK+PVD +VL
Sbjct: 661 MEAYEVQWISKASADQRKGRAGRTGPGHCYRLYSSAVYNNILPDFSCAEISKVPVDSIVL 720

Query: 181 LMKSMGINKVANFPFPTPPEVADIIEAERCLKVLEALDTDGRLTSLGKAM 330
           ++KSM I+KV  FPFPTPPE A ++EAERCLK LEALD  GRLTSLGKAM
Sbjct: 721 VLKSMHIDKVEKFPFPTPPEAAALVEAERCLKTLEALDNTGRLTSLGKAM 770


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