BLASTX nr result

ID: Bupleurum21_contig00027591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027591
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38779.2| Polyprotein, putative [Solanum demissum]               149   1e-33
gb|AAT39281.2| Integrase core domain containing protein [Solanum...   149   1e-33
gb|AAT38708.1| Putative polyprotein, identical [Solanum demissum]     145   1e-32
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   131   2e-28
emb|CAN79529.1| hypothetical protein VITISV_026262 [Vitis vinifera]   126   9e-27

>gb|AAT38779.2| Polyprotein, putative [Solanum demissum]
          Length = 369

 Score =  149 bits (375), Expect = 1e-33
 Identities = 77/185 (41%), Positives = 111/185 (60%)
 Frame = -3

Query: 559 LIQFNPTSQLPIKLLGSQNFTTWKSQFEXXXXXXXXXXXXXGSLPVPPANIVDGDKSTPN 380
           ++QFNP +QLPIKL GS  F+ WK+Q               GS P P   +   ++   N
Sbjct: 16  IVQFNPVTQLPIKLTGSHIFSLWKAQVSMLMRGHNLFGHLNGSRPAPARTVAQNNQDIEN 75

Query: 379 PEYRLWFCQNKLIHNALLATVDATLASMVATAPDAHSAWKSLHTSFANKSQTRIFSLRDQ 200
           P +  W+ Q++LI NA+LA+VD  L + V  A  + +AW +LHT++A KSQTRIF     
Sbjct: 76  PAFVSWYRQDQLIQNAILASVDPNLIATVVAASISQAAWDALHTAYAKKSQTRIFKTLP- 134

Query: 199 LSKASKDNRLIVGYLRDIKSIADELATAGSHVSNAELVTKILSGLGSEYNPLASAIRARE 20
                     +  YL  ++S+ DELATAG+ +SN EL+ KIL+GLG ++  +++AIRAR+
Sbjct: 135 ----------VADYLHQVRSLCDELATAGAPMSNEELIVKILTGLGPKFREISAAIRARD 184

Query: 19  SQISY 5
           S ISY
Sbjct: 185 SAISY 189


>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
          Length = 1760

 Score =  149 bits (375), Expect = 1e-33
 Identities = 77/185 (41%), Positives = 111/185 (60%)
 Frame = -3

Query: 559 LIQFNPTSQLPIKLLGSQNFTTWKSQFEXXXXXXXXXXXXXGSLPVPPANIVDGDKSTPN 380
           ++QFNP +QLPIKL GS  F+ WK+Q               GS P P   +   ++   N
Sbjct: 16  IVQFNPVTQLPIKLTGSHIFSLWKAQVSMLMRGHNLFGHLNGSRPAPARTVAQNNQDIEN 75

Query: 379 PEYRLWFCQNKLIHNALLATVDATLASMVATAPDAHSAWKSLHTSFANKSQTRIFSLRDQ 200
           P +  W+ Q++LI NA+LA+VD  L + V  A  + +AW +LHT++A KSQTRIF     
Sbjct: 76  PAFVSWYRQDQLIQNAILASVDPNLIATVVAASISQAAWDALHTAYAKKSQTRIFKTLP- 134

Query: 199 LSKASKDNRLIVGYLRDIKSIADELATAGSHVSNAELVTKILSGLGSEYNPLASAIRARE 20
                     +  YL  ++S+ DELATAG+ +SN EL+ KIL+GLG ++  +++AIRAR+
Sbjct: 135 ----------VADYLHQVRSLCDELATAGAPMSNEELIVKILTGLGPKFREISAAIRARD 184

Query: 19  SQISY 5
           S ISY
Sbjct: 185 SAISY 189


>gb|AAT38708.1| Putative polyprotein, identical [Solanum demissum]
          Length = 878

 Score =  145 bits (367), Expect = 1e-32
 Identities = 78/165 (47%), Positives = 99/165 (60%)
 Frame = -3

Query: 559 LIQFNPTSQLPIKLLGSQNFTTWKSQFEXXXXXXXXXXXXXGSLPVPPANIVDGDKSTPN 380
           ++QFNP +QLPIKL G+ NF TWK+Q               G+   P   I   D +   
Sbjct: 20  VVQFNPAAQLPIKLQGNLNFATWKAQLVMLLNGHKLIGHLIGAKSAPLTTITQTDSTIFI 79

Query: 379 PEYRLWFCQNKLIHNALLATVDATLASMVATAPDAHSAWKSLHTSFANKSQTRIFSLRDQ 200
            EY LWFCQ++LI  A++A+VD T+   VATA  A  AW  LHT++ANKS TRIFSLRDQ
Sbjct: 80  YEYELWFCQDQLIQQAMMASVDPTITPTVATASSAKVAWDLLHTTYANKSHTRIFSLRDQ 139

Query: 199 LSKASKDNRLIVGYLRDIKSIADELATAGSHVSNAELVTKILSGL 65
           L    K ++ +  YL +I+SI D L  AGS V + EL  K LSGL
Sbjct: 140 LQNMKKASKTVATYLHEIRSIVDALKVAGSPVVDDELAVKNLSGL 184


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  131 bits (330), Expect = 2e-28
 Identities = 70/187 (37%), Positives = 116/187 (62%), Gaps = 1/187 (0%)
 Frame = -3

Query: 559 LIQFNPTSQLPIKLLGSQNFTTWKSQFEXXXXXXXXXXXXXGSLPVPPANIVDGDKST-P 383
           +I  N T+QLPIKL  + NF +WK+QF+             G+   P   I+  D +T  
Sbjct: 23  IISINATAQLPIKL-NNNNFPSWKAQFDALLYGYDLMGFLDGNKTCPSKEIIAEDGTTVS 81

Query: 382 NPEYRLWFCQNKLIHNALLATVDATLASMVATAPDAHSAWKSLHTSFANKSQTRIFSLRD 203
           NP++ +W  Q+KL+ +A+LA++   +  ++A A  +  AW  LH  +ANKS++R+ +L++
Sbjct: 82  NPDFVIWTRQDKLLLHAILASLSEGVVPLIAAATSSRDAWVKLHKLYANKSRSRVMNLKE 141

Query: 202 QLSKASKDNRLIVGYLRDIKSIADELATAGSHVSNAELVTKILSGLGSEYNPLASAIRAR 23
           +L+  + + R +  YL+ IK IADELA   +H+S+ +L    L+GLGS +  +++AIRAR
Sbjct: 142 KLTNITCNTRSVAEYLQTIKGIADELALIDTHLSDDDLTIFALNGLGSGFKEISAAIRAR 201

Query: 22  ESQISYE 2
           E+ IS+E
Sbjct: 202 ETPISFE 208


>emb|CAN79529.1| hypothetical protein VITISV_026262 [Vitis vinifera]
          Length = 752

 Score =  126 bits (316), Expect = 9e-27
 Identities = 67/187 (35%), Positives = 112/187 (59%), Gaps = 1/187 (0%)
 Frame = -3

Query: 559 LIQFNPTSQLPIKLLGSQNFTTWKSQFEXXXXXXXXXXXXXGSLPVPPANI-VDGDKSTP 383
           +I  N  +QLPIKL  S NF  WK+QF+             G+   P   I V+   +  
Sbjct: 23  IISINAXTQLPIKL-NSNNFPFWKAQFDALLYGYDLMGFLDGTKTCPSKEIIVEYGTTVS 81

Query: 382 NPEYRLWFCQNKLIHNALLATVDATLASMVATAPDAHSAWKSLHTSFANKSQTRIFSLRD 203
           NP + +W  Q+KL+ +A+LA++   +  ++ATA  +  AW  LH  +ANKS++R+ +L++
Sbjct: 82  NPNFSIWIRQDKLLLHAILASLSKGVVPLIATATSSRDAWVKLHKLYANKSRSRVMNLKE 141

Query: 202 QLSKASKDNRLIVGYLRDIKSIADELATAGSHVSNAELVTKILSGLGSEYNPLASAIRAR 23
           +L+  + + R +  YL+ IK I DELA   +H+S+ +L    L+GLGS +  +++AIRAR
Sbjct: 142 KLTNITCNTRSVAEYLQTIKGIVDELALIDTHLSDDDLTIFALNGLGSGFKDISAAIRAR 201

Query: 22  ESQISYE 2
           ++ +S+E
Sbjct: 202 DTPVSFE 208


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