BLASTX nr result

ID: Bupleurum21_contig00027589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027589
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526949.1| PREDICTED: F-box/LRR-repeat protein At5g6352...   162   3e-38
ref|XP_003523154.1| PREDICTED: F-box/LRR-repeat protein At5g6352...   162   3e-38
ref|XP_003602796.1| F-box/LRR-repeat protein [Medicago truncatul...   155   2e-36
ref|XP_002318743.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
ref|XP_002511158.1| conserved hypothetical protein [Ricinus comm...   151   5e-35

>ref|XP_003526949.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Glycine max]
          Length = 540

 Score =  162 bits (410), Expect = 3e-38
 Identities = 87/171 (50%), Positives = 114/171 (66%), Gaps = 1/171 (0%)
 Frame = -2

Query: 516 SSIDAIGDDLLGNVLSRLPSSSFASAACVSRYWNQICDTVLCTPKLSSAHSSNPSLQEAV 337
           +S+  + +DLL N+L+RLPS  FASAACVS+ WN +C  +L  PKLSSA S NPSL +AV
Sbjct: 27  TSLSMLNEDLLQNILARLPSLHFASAACVSKSWNSLCSRILSRPKLSSAISLNPSLPDAV 86

Query: 336 EEVFNKVFAELIRPHFAIVTV-TSLDLEEARQLITKKLGSNIPIIYTAPIGLIGRDAITN 160
            EV +KV +E IRPHFAI  + T  +  +   LI K LG NIP+I T   G++GRDA+T+
Sbjct: 87  NEVVHKVLSEPIRPHFAIANIGTGFNTAKTLCLIRKSLGFNIPVIVTVANGIMGRDAVTD 146

Query: 159 EFKEIQWEVVYSEDYSPSVNFFDNDSAVPQSRVICLTVGFLPGLKVAAVPL 7
           EFKE++W  ++S     S   F N+  V       LTVG+LPGLKV A+PL
Sbjct: 147 EFKEVKWGALFSGFGEESYTRFINEGLV-------LTVGYLPGLKVEALPL 190


>ref|XP_003523154.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Glycine max]
          Length = 538

 Score =  162 bits (410), Expect = 3e-38
 Identities = 86/171 (50%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
 Frame = -2

Query: 516 SSIDAIGDDLLGNVLSRLPSSSFASAACVSRYWNQICDTVLCTPKLSSAHSSNPSLQEAV 337
           +++  + +DLL N+L+RLP+  FASAACVS+ WN +C+ +L  PKLSSA S NPSL +AV
Sbjct: 26  TNLSMLNEDLLQNILARLPALHFASAACVSKSWNSLCNRILTRPKLSSAISLNPSLPDAV 85

Query: 336 EEVFNKVFAELIRPHFAIVTV-TSLDLEEARQLITKKLGSNIPIIYTAPIGLIGRDAITN 160
            EV +KV +E IRPHFAI  + T     +   LI + LGSNIP+I T   G++GRDA+T+
Sbjct: 86  NEVVHKVLSEPIRPHFAIANIGTGFSTAKTLCLIRQSLGSNIPVIVTVASGIMGRDAVTD 145

Query: 159 EFKEIQWEVVYSEDYSPSVNFFDNDSAVPQSRVICLTVGFLPGLKVAAVPL 7
           EFKE++W  ++S     S   F N+  V       LTVG+LPGLKV AVPL
Sbjct: 146 EFKEVKWGALFSGFGEESYTRFINEGLV-------LTVGYLPGLKVEAVPL 189


>ref|XP_003602796.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355491844|gb|AES73047.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 579

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/177 (44%), Positives = 120/177 (67%), Gaps = 5/177 (2%)
 Frame = -2

Query: 516 SSIDAIGDDLLGNVLSRLPSSSFASAACVSRYWNQICDTVLCTPKLSSAHSSNPSLQEAV 337
           + I+ + DDLL N+ +RLP+ SFASA CV++ WN +C+ ++  PKL+SA S NPSL++AV
Sbjct: 24  TGINVLSDDLLLNIFTRLPAISFASATCVNKSWNSVCNRIISRPKLASALSLNPSLRDAV 83

Query: 336 EEVFNKVFAELIRPHFAIVTV-TSLDLEEARQLITKKLGSNIPIIYTAPIGLIGRDAITN 160
            EV +KV +E IRP+FAIV +    D  +  +L+ +++G NIP++ T   G+IGRDA+T+
Sbjct: 84  NEVVDKVLSEPIRPYFAIVNIGCGFDPSKILRLVKRRVGFNIPVVVTVNNGIIGRDAVTD 143

Query: 159 EFKEIQWEVVYS----EDYSPSVNFFDNDSAVPQSRVICLTVGFLPGLKVAAVPLLQ 1
           EFKE++W  ++S    E+Y+  +N             I LT+G LPGLKV A+PL++
Sbjct: 144 EFKEVKWGALFSGIDDEEYARHIN-----------EGIVLTIGCLPGLKVEAIPLIR 189


>ref|XP_002318743.1| predicted protein [Populus trichocarpa] gi|222859416|gb|EEE96963.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score =  153 bits (387), Expect = 1e-35
 Identities = 84/174 (48%), Positives = 114/174 (65%), Gaps = 2/174 (1%)
 Frame = -2

Query: 516 SSIDAIGDDLLGNVLSRLPSSSFASAACVSRYWNQICDTVLCTPKLSSAHSSNPSLQEAV 337
           +S  +I +DL+ N++ RLP+SSFASAACVS+ WNQIC+ +L  PK +SA S NP+ + A+
Sbjct: 13  TSFASINEDLVQNIVKRLPASSFASAACVSKSWNQICNQILSKPKFASAFSLNPNEKVAL 72

Query: 336 EEVFNKVFAELIRPHFAIVTV--TSLDLEEARQLITKKLGSNIPIIYTAPIGLIGRDAIT 163
           EEV NKV +E IRPHFAI  V  + +DL E    +  KLGS  PII +   G++GRDA+T
Sbjct: 73  EEVVNKVLSEPIRPHFAIANVIGSGVDLREKLDFLATKLGSQTPIIVSCASGIMGRDAVT 132

Query: 162 NEFKEIQWEVVYSEDYSPSVNFFDNDSAVPQSRVICLTVGFLPGLKVAAVPLLQ 1
            E +E+  E  +++    S++ F           I LTVGFLPGLKV  +PLLQ
Sbjct: 133 GEHREVMLEEYWAD--GESISCFG----------IILTVGFLPGLKVDVIPLLQ 174


>ref|XP_002511158.1| conserved hypothetical protein [Ricinus communis]
           gi|223550273|gb|EEF51760.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 534

 Score =  151 bits (382), Expect = 5e-35
 Identities = 80/173 (46%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
 Frame = -2

Query: 516 SSIDAIGDDLLGNVLSRLPSSSFASAACVSRYWNQICDTVLCTPKLSSAHSSNPSLQEAV 337
           S    + +D++ N+LSRLP+ SF SA+CVS+ WN++C  +L  PKL+SA S NPSL EAV
Sbjct: 6   SGFSLVSEDVIENILSRLPALSFVSASCVSKCWNKVCVRILSRPKLASALSLNPSLHEAV 65

Query: 336 EEVFNKVFAELIRPHFAIVTV-TSLDLEEARQLITKKLGSNIPIIYTAPIGLIGRDAITN 160
           +EV  KV  + I PHF I  +     LE   QL+TK+ G+ +P+I  A  G+IG DA T+
Sbjct: 66  DEVLGKVLLQPIVPHFVIACIGKQFSLEITHQLLTKRFGTRVPVITNAASGIIGLDAATD 125

Query: 159 EFKEIQWEVVYSEDYSPSVNFFDNDSAVPQSRVICLTVGFLPGLKVAAVPLLQ 1
           E +E++WE   S D     N  D+++    +R I L VGF+PGLKV A+PLL+
Sbjct: 126 EVREVRWE---SSDDEDDNNDPDSEANNLLNRGIVLVVGFVPGLKVEAIPLLR 175


Top