BLASTX nr result

ID: Bupleurum21_contig00027560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027560
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279773.2| PREDICTED: regulator of telomere elongation ...   181   5e-44
ref|XP_002528200.1| regulator of telomere elongation helicase 1 ...   180   9e-44
ref|XP_002298143.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_004171721.1| PREDICTED: regulator of telomere elongation ...   170   1e-40
ref|XP_004141849.1| PREDICTED: regulator of telomere elongation ...   170   1e-40

>ref|XP_002279773.2| PREDICTED: regulator of telomere elongation helicase 1-like [Vitis
           vinifera]
          Length = 1084

 Score =  181 bits (459), Expect = 5e-44
 Identities = 89/128 (69%), Positives = 106/128 (82%), Gaps = 1/128 (0%)
 Frame = -2

Query: 382 KSLGSFSTGKSARRGQDRGGKYTEDMSSQSDTPKLPTIIYTSRTHSQLRQVIKELKRSTY 203
           KSLG FSTG+S   GQ  G ++++   SQS    LPTIIY SRTHSQLRQVI+ELKR++Y
Sbjct: 61  KSLGGFSTGRSEWNGQIMGSQHSDVPHSQSAKTNLPTIIYASRTHSQLRQVIQELKRTSY 120

Query: 202 RPKMVVLGSREQLCIHEDVSLLRGRAQTNACHALCKKRQKR-YCAHFPRVAEFMTNNPDL 26
           RPKMVVLGSREQLCIHE+VSLLRGRAQTNACH+LC+KR K+ YC H+ RV++FM  NP L
Sbjct: 121 RPKMVVLGSREQLCIHEEVSLLRGRAQTNACHSLCRKRTKKGYCGHYSRVSDFMKYNPGL 180

Query: 25  GEEPIDIE 2
           G++PIDIE
Sbjct: 181 GDDPIDIE 188


>ref|XP_002528200.1| regulator of telomere elongation helicase 1 rtel1, putative
           [Ricinus communis] gi|223532412|gb|EEF34207.1| regulator
           of telomere elongation helicase 1 rtel1, putative
           [Ricinus communis]
          Length = 1049

 Score =  180 bits (457), Expect = 9e-44
 Identities = 83/127 (65%), Positives = 104/127 (81%)
 Frame = -2

Query: 382 KSLGSFSTGKSARRGQDRGGKYTEDMSSQSDTPKLPTIIYTSRTHSQLRQVIKELKRSTY 203
           KSLG F+TGK  R G+  G K  +   S S+   LPTI+YTSRTHSQLRQV++ELKRS+Y
Sbjct: 61  KSLGPFTTGKIERNGRTAGSKSDDTPPSPSEGTALPTIVYTSRTHSQLRQVVQELKRSSY 120

Query: 202 RPKMVVLGSREQLCIHEDVSLLRGRAQTNACHALCKKRQKRYCAHFPRVAEFMTNNPDLG 23
           RPKMV+LGSREQLCIH++VSLLRG+AQTNACH +CK+R+KR C HF RV++++  NP LG
Sbjct: 121 RPKMVILGSREQLCIHDEVSLLRGKAQTNACHYVCKRREKRQCTHFARVSDYVRKNPHLG 180

Query: 22  EEPIDIE 2
           +EP+DIE
Sbjct: 181 DEPVDIE 187


>ref|XP_002298143.1| predicted protein [Populus trichocarpa] gi|222845401|gb|EEE82948.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score =  179 bits (453), Expect = 3e-43
 Identities = 86/127 (67%), Positives = 101/127 (79%)
 Frame = -2

Query: 382 KSLGSFSTGKSARRGQDRGGKYTEDMSSQSDTPKLPTIIYTSRTHSQLRQVIKELKRSTY 203
           KSLG FSTGK  R G+  GGK     SSQS+   LPTI+Y SRTHSQLRQVI+ELKRS+Y
Sbjct: 62  KSLGGFSTGKIERNGRIAGGKLDIVPSSQSEDRNLPTIVYASRTHSQLRQVIQELKRSSY 121

Query: 202 RPKMVVLGSREQLCIHEDVSLLRGRAQTNACHALCKKRQKRYCAHFPRVAEFMTNNPDLG 23
           RPKMV+LGSREQLCIHE+VSLLRG+ Q NACH +CK R KR C H+ RVA+++  NP LG
Sbjct: 122 RPKMVILGSREQLCIHEEVSLLRGKVQNNACHLICKTRGKRQCTHYSRVADYVKCNPHLG 181

Query: 22  EEPIDIE 2
           +EP+DIE
Sbjct: 182 DEPVDIE 188


>ref|XP_004171721.1| PREDICTED: regulator of telomere elongation helicase 1-like,
           partial [Cucumis sativus]
          Length = 695

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/127 (65%), Positives = 102/127 (80%)
 Frame = -2

Query: 382 KSLGSFSTGKSARRGQDRGGKYTEDMSSQSDTPKLPTIIYTSRTHSQLRQVIKELKRSTY 203
           KSLG FS+G+S    Q+  G     +SSQS +PK PTI+YT+RTHSQLRQVI+ELK+++Y
Sbjct: 61  KSLGEFSSGRSVSNSQNIEGD-PNVLSSQSTSPKHPTIVYTTRTHSQLRQVIQELKKTSY 119

Query: 202 RPKMVVLGSREQLCIHEDVSLLRGRAQTNACHALCKKRQKRYCAHFPRVAEFMTNNPDLG 23
           RPKMVVLGSREQLCIHEDVSLLRGR Q NAC +LC+K  KR+C H+ RV+ ++  NP LG
Sbjct: 120 RPKMVVLGSREQLCIHEDVSLLRGRTQNNACRSLCRKSGKRHCKHYNRVSGYVKENPHLG 179

Query: 22  EEPIDIE 2
           +EPIDIE
Sbjct: 180 DEPIDIE 186


>ref|XP_004141849.1| PREDICTED: regulator of telomere elongation helicase 1-like
           [Cucumis sativus]
          Length = 1054

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/127 (65%), Positives = 102/127 (80%)
 Frame = -2

Query: 382 KSLGSFSTGKSARRGQDRGGKYTEDMSSQSDTPKLPTIIYTSRTHSQLRQVIKELKRSTY 203
           KSLG FS+G+S    Q+  G     +SSQS +PK PTI+YT+RTHSQLRQVI+ELK+++Y
Sbjct: 61  KSLGEFSSGRSVSNSQNIEGD-PNVLSSQSTSPKHPTIVYTTRTHSQLRQVIQELKKTSY 119

Query: 202 RPKMVVLGSREQLCIHEDVSLLRGRAQTNACHALCKKRQKRYCAHFPRVAEFMTNNPDLG 23
           RPKMVVLGSREQLCIHEDVSLLRGR Q NAC +LC+K  KR+C H+ RV+ ++  NP LG
Sbjct: 120 RPKMVVLGSREQLCIHEDVSLLRGRTQNNACRSLCRKSGKRHCKHYNRVSGYVKENPHLG 179

Query: 22  EEPIDIE 2
           +EPIDIE
Sbjct: 180 DEPIDIE 186


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