BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027529
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   120   3e-25
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   115   9e-24
ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus ...   105   7e-21
ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...   102   8e-20
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    99   7e-19

>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  120 bits (301), Expect = 3e-25
 Identities = 85/250 (34%), Positives = 124/250 (49%), Gaps = 16/250 (6%)
 Frame = -1

Query: 703 FVKKHLQRNIECNPDSGMVVQAPQKGSDLYLADVDPLCDITATELVEPLKARVSGAEFVG 524
           F+  HL  +IE   +  +++    K S+LY    D L +I   +   PL     G + +G
Sbjct: 40  FIYLHLNHSIESPCNLSIIL----KSSELYSLSFDLLDNIQPLD--HPLMCYNHGVKILG 93

Query: 523 SCNGLVCLYKD-EDILLWNPATRKCRKLPKTTNMLIPCMLIGSCLI---GFGYDHVNDDY 356
           SCNGL+C+    +DI LWNP+ R  R +P     L     + SC +   GFGYD  NDDY
Sbjct: 94  SCNGLLCICNIVDDIALWNPSIRAHRVVPYLPVELKRYFGMCSCRVSVFGFGYDLSNDDY 153

Query: 355 KVMRT-----YDSQIWGIMVSVYSLKSNSWTRADTIDNEILIEGPFGVHVNGTLYW---- 203
           K++R       D + +   V V+SL+ NSW R   +   +L  G  G++ NG L+W    
Sbjct: 154 KLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALHWLVSQ 213

Query: 202 ---PTESDYIVAFDLGVGEHRKLLRPVLDDTGMRGYSFIAFNRRLFLIAHYRSSRTDIWM 32
               T +D IVA DLGV ++  + +P   D              L L+A+ RS R D+W+
Sbjct: 214 DPDSTVADTIVALDLGVEDYHVVPKPEFVDMNC-NMGVGVLQGCLSLLAYARSERVDVWV 272

Query: 31  MNENGVENSW 2
           M E  V+ SW
Sbjct: 273 MEEYMVKESW 282


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  115 bits (288), Expect = 9e-24
 Identities = 84/256 (32%), Positives = 130/256 (50%), Gaps = 21/256 (8%)
 Frame = -1

Query: 706 DFVKKHLQRNIECNPDSGMVVQAPQKGSDLYLADVDP---LCD-ITATELVEPLKARVSG 539
           +FVK HL+ +++ + +  ++++     S ++  D +    L D +T  EL  PL     G
Sbjct: 39  NFVKLHLKHSMDTSSNLYIILRTT---SHVHYMDFEQNLVLNDCVTLKELNHPLMCYNHG 95

Query: 538 AEFVGSCNGLVCLYKD-EDILLWNPATRKCRKLPKTTNMLIPCMLIGSCLI---GFGYDH 371
            + +GS NGL+C+    +DI +WNP+TRK R +P     L       SC +   GFGYD 
Sbjct: 96  IKVLGSVNGLLCISNVVDDIAVWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDS 155

Query: 370 VNDDYKVMRTYD-----SQIWGIMVSVYSLKSNSWTRADTIDNEILIEGPFGVHVNGTLY 206
           V DDYK++R         + +   V VYSL+  SW R   +   +   G  GV  NG L+
Sbjct: 156 VRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALH 215

Query: 205 W-------PTESDYIVAFDLGVGEHRKLLRPVLDDTGMRGYSFIAFNRR-LFLIAHYRSS 50
           W          ++ +VA DLGV ++R++L+P   D     Y  +   R  L  +A++   
Sbjct: 216 WVVGENPESNVANIVVALDLGVEDYREVLQPEYKDKNF--YIDLGVLRGCLCFLANFLGE 273

Query: 49  RTDIWMMNENGVENSW 2
           R D+WMM E GV+ SW
Sbjct: 274 RVDVWMMKEYGVKESW 289


>ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540308|gb|EEF41879.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score =  105 bits (263), Expect = 7e-21
 Identities = 81/256 (31%), Positives = 124/256 (48%), Gaps = 21/256 (8%)
 Frame = -1

Query: 706 DFVKKHLQRNIECNPDSGMVVQAPQKG--SDLYLAD-----VDPLCDITATELVEPLKAR 548
           DF+K HL  +I+  P   +++   Q    ++ Y AD     +DP+      +L  P+K++
Sbjct: 39  DFIKAHLDTSIQTKPRKKLILLRHQSNGVAEFYAADHNGGLIDPI------KLKSPIKSK 92

Query: 547 VSGAEFVGSCNGLVCLYKDED-ILLWNPATRKCRKL--PKTTNMLIPCMLIGSCLIGFGY 377
            +G   VGSCN LV L ++ D +LLWNP T + + L  P+          +   + G GY
Sbjct: 93  SNGTRIVGSCNSLVLLMQNTDKLLLWNPFTTQYKILPEPQREKATFTSQYLQYDVFGLGY 152

Query: 376 DHVNDDYKVMRTYDSQIWGIMVSVYSLKSNSWTRADTI--DNEILIEGPFGVHVNGTLYW 203
           D  +DDYKV+R    +     V +YSL+SNSWTR      DN        G HV+GTLYW
Sbjct: 153 DAASDDYKVVRIQKCRSKKDGVGIYSLRSNSWTRLHDFPCDNYEFDWTAMGKHVSGTLYW 212

Query: 202 ----PTESDYIVAFDLGVGEHRKLLRPVLDDTGMRGYSFI-AFNRRLFL----IAHYRSS 50
                T S  I+AFD+   +   L  P       R Y+ +     RL L     A Y  +
Sbjct: 213 LCAKETYSVSIIAFDILTEKFHALQIPA---QYSRQYNKLHVVEGRLCLSSRRYADYHKT 269

Query: 49  RTDIWMMNENGVENSW 2
           + ++++  ++G   +W
Sbjct: 270 KLNLYVGEKHGARLTW 285


>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score =  102 bits (254), Expect = 8e-20
 Identities = 83/258 (32%), Positives = 123/258 (47%), Gaps = 23/258 (8%)
 Frame = -1

Query: 706 DFVKKHLQRNIECNPDSGMVVQAPQKGSDLYLADVDPLCDITATELVEPLKARVSGA--- 536
           +F+K HL+++ E N +  ++  A       Y  ++D L  I   E   P+K     +   
Sbjct: 40  NFIKTHLKKSRETNSNLTLIF-AGSHPDYFYNVNLDSLNSIIKLE--NPIKGPTDASHNI 96

Query: 535 EFVGSCNGLVCLYKDED-ILLWNPATRKCRKLP--KTTNMLIPCMLIGSCLIGFGYDHVN 365
           + VGSCNGL+C       I L NP+TRK + LP  +    +    + G+   GFG D V+
Sbjct: 97  KIVGSCNGLLCFGNASGRITLMNPSTRKHKVLPFLRMDASVKGKSVWGAWAFGFGCDSVH 156

Query: 364 DDYKVMRT-----YDSQIWGIMVSVYSLKSNSWTRADTIDNEILIEGPFGVHVNGTLYWP 200
           DDYKV+R      +  Q +     VYSLKSNSW + D +   I  +   GV V   L+W 
Sbjct: 157 DDYKVIRLGQYLDFSLQQFETDTMVYSLKSNSWRKIDGMSCIIGFDQKMGVLVGEALHWL 216

Query: 199 T-------ESDYIVAFDLGVGEHRKLLRPVLDDTGMRGYSFIAFN-----RRLFLIAHYR 56
                     D IVA +LGV + R++  P +   G       + N       L + A Y 
Sbjct: 217 ASRDRILLNPDVIVALNLGVEDFREVPGPDVVVVGANPNQNPSLNLGVVEEWLSVFAIYN 276

Query: 55  SSRTDIWMMNENGVENSW 2
           ++R DIW+M E G ++SW
Sbjct: 277 NTRLDIWVMKEYGAKDSW 294


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 26/262 (9%)
 Frame = -1

Query: 709 QDFVKKHLQRNIECNPDSGMVVQAPQKGSDLYLADVDPLCDITATELVEPLKARVSGAEF 530
           Q F   HL R++    ++ ++++     SDLY  +  P  D     L  PL    +    
Sbjct: 39  QHFNSVHLSRSLSLTSNTTLILRLD---SDLYQTNF-PTLD-PPLFLNHPLMCYSNNITL 93

Query: 529 VGSCNGLVCLYK-DEDILLWNPATRKCR---KLPKTTNMLIP-CMLIGSCLIGFGYDHVN 365
           +GSCNGL+C+    +DI  WNP+ R+ R    LP     L P   L  + + GFG+DH +
Sbjct: 94  LGSCNGLLCISNVADDIAFWNPSLRQHRILPSLPLPRRRLHPDTTLFAARVYGFGFDHTS 153

Query: 364 DDYKVM----------RTYDSQIWGIMVSVYSLKSNSWTRADTIDNEILIEGPFGVHVNG 215
            DYK++          R++DSQ     V +Y+L++N+W    ++   +      GV V  
Sbjct: 154 PDYKLVRISYFVDLQDRSFDSQ-----VKLYTLRANAWKTLPSMPYALCCARTMGVFVGN 208

Query: 214 TLYW-------PTESDYIVAFDLGVGEHRKLLRPVLDDTGMRGYSF----IAFNRRLFLI 68
           +L+W       P + D IVAFDL    H       L DTG  G  F          L + 
Sbjct: 209 SLHWVVTRKLEPDQPDLIVAFDL---THEIFTELPLPDTGGVGGGFEIDVALLGDSLCMT 265

Query: 67  AHYRSSRTDIWMMNENGVENSW 2
            ++ +S+ D+W+M E    +SW
Sbjct: 266 VNFHNSKMDVWVMREYNRGDSW 287