BLASTX nr result

ID: Bupleurum21_contig00027507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027507
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officin...    63   2e-08
gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     63   3e-08
gb|AFU25704.1| gag-pol precursor [Castanea mollissima]                 62   5e-08
emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]          62   5e-08
emb|CAN81970.1| hypothetical protein VITISV_017457 [Vitis vinifera]    57   2e-06

>gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officinalis]
          Length = 869

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/113 (30%), Positives = 54/113 (47%)
 Frame = -1

Query: 380 KDDLRRAIQKVMASKVDATQSAITSPFSASILKAQLPPWFRLSPHLSFNGTGDPVDHLEQ 201
           K D  +A    +A++ +  +  +  P+ A    A  PP F+      F+GTG P  H+  
Sbjct: 573 KVDELKARLNAIANRSELREEGVVRPYPAEWDTAPYPPKFKAPTLQPFDGTGSPNQHIYY 632

Query: 200 FSTEMEVYQISELAKCRLLAGTLKDNAHQWFRRLASSSITSWKEFVTLFLTQF 42
           F ++      ++    RL  GTLK  A +WF +L + SI  W +   LFL +F
Sbjct: 633 FKSQTRDVVANDAILTRLFIGTLKGVAFEWFMKLPAGSIQKWVDLERLFLARF 685


>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/113 (30%), Positives = 53/113 (46%)
 Frame = -1

Query: 380 KDDLRRAIQKVMASKVDATQSAITSPFSASILKAQLPPWFRLSPHLSFNGTGDPVDHLEQ 201
           K D   A    MA++ +  +  +  P+ A    A  PP F+      F+GTG P  H+  
Sbjct: 515 KVDELEARLNAMANRSELREEGVIRPYPAEWDTAPYPPKFKAPTLQPFDGTGSPNQHIYY 574

Query: 200 FSTEMEVYQISELAKCRLLAGTLKDNAHQWFRRLASSSITSWKEFVTLFLTQF 42
           F ++      ++    RL  GTLK  A +WF +L + SI  W +   LFL +F
Sbjct: 575 FKSQTGDVVANDAILTRLFIGTLKGVAFEWFMKLPAGSIQKWVDLERLFLARF 627


>gb|AFU25704.1| gag-pol precursor [Castanea mollissima]
          Length = 428

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/102 (34%), Positives = 53/102 (51%)
 Frame = -1

Query: 308 SPFSASILKAQLPPWFRLSPHLSFNGTGDPVDHLEQFSTEMEVYQISELAKCRLLAGTLK 129
           SPF A I +A+LP  F       +NG  DPV+H+   + +M VY  +E   CR+ + +L 
Sbjct: 11  SPFVARINRAKLPRRFSQPIFTVYNGRTDPVEHVSHVNQKMVVYSNNEALMCRVCSSSLG 70

Query: 128 DNAHQWFRRLASSSITSWKEFVTLFLTQFQASMCYAPPVNIL 3
             A +WF  LA SS+ S++E    F  +F        P++ L
Sbjct: 71  PVAMRWFDALAESSLASFEELTRAFGARFITCSRILKPLDAL 112


>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1455

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
 Frame = -1

Query: 374 DLRRAIQKVMASKVD-ATQSAITSPFSASILKAQLPPWFRLSPHLSFNG---TGDPVDHL 207
           +L+R +Q +   +   A +  + SPF+  IL  ++P   RLS  + + G     DP DH+
Sbjct: 132 ELKREVQALNRDRDGTAEEDEMGSPFAPHILAPEIPVSMRLSNPVVYTGDRNARDPRDHI 191

Query: 206 EQFSTEMEVYQISELAKCRLLAGTLKDNAHQWFRRLASSSITSWKEFVTLFLTQFQASMC 27
            QF   M++    + A C +   TL   A  WF +L   SI S+ E   LF+ QF  +  
Sbjct: 192 NQFLAVMDILSTPDHALCWIFRSTLTGRAQAWFSQLPRGSIRSFDELRELFVRQFACNRR 251

Query: 26  YAPPVNIL 3
           Y   +  L
Sbjct: 252 YPKTIGHL 259


>emb|CAN81970.1| hypothetical protein VITISV_017457 [Vitis vinifera]
          Length = 986

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/104 (25%), Positives = 60/104 (57%)
 Frame = -1

Query: 314 ITSPFSASILKAQLPPWFRLSPHLSFNGTGDPVDHLEQFSTEMEVYQISELAKCRLLAGT 135
           +++PFS+ I+K + P  F +    +++G+ DP DH+  +   M +   +++  C++   +
Sbjct: 404 LSTPFSSLIIKYEPPRGFIVPKFSTYDGSSDPFDHIMHYRQLMTLDIGNDMLLCKVFPAS 463

Query: 134 LKDNAHQWFRRLASSSITSWKEFVTLFLTQFQASMCYAPPVNIL 3
           L+  A  WF RL+++SI ++++   +F+ Q+  S  +   ++ L
Sbjct: 464 LQGQALSWFHRLSANSIDNFRDLSEVFVGQYLCSARHKQNISTL 507


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