BLASTX nr result

ID: Bupleurum21_contig00027503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027503
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ86665.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   2e-06

>dbj|BAJ86665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 255

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
 Frame = -2

Query: 666 YFEPEMLSYPLKKLIMAKDGSRFVTVLYALFENGVEARLDVKLSN--VKSVFDLFGIVNA 493
           Y E   L  PL +      G   V V YA+   GVE  + V+L++  VK    LFG + A
Sbjct: 103 YREDPALDRPLLETANTPYGP--VEVTYAILSQGVECEVAVRLTHRDVKDPISLFGRIIA 160

Query: 492 RTSAIKELAWSSILFFKDFDEKIEVGSGHEIIIPLARPLVAVPLGSQLILQFSLSMDDND 313
           R+          +LF+ +  + I   SG   +IPLAR  +AVPL   L+++  L  D  D
Sbjct: 161 RSELFDI---GCVLFYNEDVKDICARSGE--LIPLARSQLAVPLHKVLVIELDLHSDCGD 215

Query: 312 KMVEDTMVFEAKRDGASSKTRVCSKGLIEVEV 217
           +++  T+ F+   +G     R+ SK   E+EV
Sbjct: 216 EIMRGTLEFDPLPEG-EQMGRLISKSGTEIEV 246


Top