BLASTX nr result

ID: Bupleurum21_contig00027435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027435
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70759.1| hypothetical protein VITISV_012852 [Vitis vinifera]    90   2e-16
ref|XP_002265259.1| PREDICTED: protein PLANT CADMIUM RESISTANCE ...    89   4e-16
gb|ADN33974.1| hypothetical protein [Cucumis melo subsp. melo]         77   2e-12
ref|XP_002307927.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_004136605.1| PREDICTED: protein PLANT CADMIUM RESISTANCE ...    70   2e-10

>emb|CAN70759.1| hypothetical protein VITISV_012852 [Vitis vinifera]
          Length = 188

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/60 (65%), Positives = 44/60 (73%)
 Frame = -2

Query: 253 MESQSSYVPPPYIPLDQSDPVVEITPSNIGTPVQDHRSNEPAQWSSGICACCDDMQSCTL 74
           M+ Q SYVPPPYIPL QSD  VEI P +   P   H S+ P+QWSSGICACCDDMQSC +
Sbjct: 1   MKGQGSYVPPPYIPLGQSDSEVEIVPHDSDLPXHRHTSDSPSQWSSGICACCDDMQSCCI 60


>ref|XP_002265259.1| PREDICTED: protein PLANT CADMIUM RESISTANCE 10-like isoform 1
           [Vitis vinifera] gi|297741748|emb|CBI32880.3| unnamed
           protein product [Vitis vinifera]
          Length = 188

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 39/60 (65%), Positives = 44/60 (73%)
 Frame = -2

Query: 253 MESQSSYVPPPYIPLDQSDPVVEITPSNIGTPVQDHRSNEPAQWSSGICACCDDMQSCTL 74
           M+ Q SYVPPPYIPL QSD  VEI P +   P   H S+ P+QWSSGICACCDDMQSC +
Sbjct: 1   MKGQGSYVPPPYIPLGQSDSEVEIVPHDSDLPDHRHTSDSPSQWSSGICACCDDMQSCCI 60


>gb|ADN33974.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 64

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/62 (54%), Positives = 41/62 (66%)
 Frame = -2

Query: 253 MESQSSYVPPPYIPLDQSDPVVEITPSNIGTPVQDHRSNEPAQWSSGICACCDDMQSCTL 74
           M+   SYVPP Y+P+ QSD   EI   +   P  +   +  +QWSSGICACCDDMQSCTL
Sbjct: 1   MDGPRSYVPPAYVPISQSDSETEIISRDESNPTPNQLKDGLSQWSSGICACCDDMQSCTL 60

Query: 73  LS 68
           LS
Sbjct: 61  LS 62


>ref|XP_002307927.1| predicted protein [Populus trichocarpa] gi|222853903|gb|EEE91450.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/67 (56%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
 Frame = -2

Query: 253 MESQSSYVPPPYIPLDQSDPVVEITPSNIGTPVQDHRSNE-------PAQWSSGICACCD 95
           M+ +SSYVPP YIPLDQSD   E  P N      + RS         PAQWSSGICACCD
Sbjct: 1   MKGESSYVPPRYIPLDQSDLETESVPRN------EERSGAASVVGDGPAQWSSGICACCD 54

Query: 94  DMQSCTL 74
           DMQSC +
Sbjct: 55  DMQSCCI 61


>ref|XP_004136605.1| PREDICTED: protein PLANT CADMIUM RESISTANCE 10-like [Cucumis
           sativus] gi|449511492|ref|XP_004163969.1| PREDICTED:
           protein PLANT CADMIUM RESISTANCE 10-like [Cucumis
           sativus]
          Length = 189

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/58 (51%), Positives = 38/58 (65%)
 Frame = -2

Query: 253 MESQSSYVPPPYIPLDQSDPVVEITPSNIGTPVQDHRSNEPAQWSSGICACCDDMQSC 80
           M+   SYVPP Y+P+ QSD   EI+  +   P  +   +  +QWSSGICACCDDMQSC
Sbjct: 1   MDGPRSYVPPAYVPISQSDLEAEISSRDESNPTPNELKDGLSQWSSGICACCDDMQSC 58


Top